Exploring Brain Networks via Structured Sparse Representation of fMRI Data
详细信息    查看全文
  • 关键词:Sparse representation ; Dictionary learning ; Group sparsity ; Functional networks
  • 刊名:Lecture Notes in Computer Science
  • 出版年:2016
  • 出版时间:2016
  • 年:2016
  • 卷:9900
  • 期:1
  • 页码:55-62
  • 全文大小:1,969 KB
  • 参考文献:1.Lv, J., Jiang, X., Li, X., Zhu, D., Chen, H., Zhang, T., Hu, X., Han, J., Huang, H., Zhang, J.: Sparse representation of whole
    ain fMRI signals for identification of functional networks. Med. Image Anal. 20, 112–134 (2015)CrossRef
    2.Kim, S., Xing, E.P.: Tree-guided group lasso for multi-task regression with structured sparsity. In: ICML, pp. 543–550 (2010)
    3.Ye, J., Liu, J.: Sparse methods for biomedical data. ACM SIGKDD Explor. Newslett. 14, 4–15 (2012)CrossRef
    4.Mairal, J., Bach, F., Ponce, J., Sapiro, G.: Online learning for matrix factorization and sparse coding. J. Mach. Learn. Res. 11, 19–60 (2010)MathSciNet MATH
    5.Tibshirani, R.: Regression shrinkage and selection via the lasso. J. Roy. Stat. Soc. Ser. B (Methodological) 58, 267–288 (1996)MathSciNet MATH
    6.Liu, J., Ji, S., Ye, J.: Multi-task feature learning via efficient l 2, 1-norm minimization. In: Proceedings of the Twenty-Fifth Conference on Uncertainty in Artificial Intelligence, pp. 339–348. AUAI Press (2009)
    7.Tzourio-Mazoyer, N., Landeau, B., Papathanassiou, D., Crivello, F., Etard, O., Delcroix, N., Mazoyer, B., Joliot, M.: Automated anatomical labeling of activations in SPM using a macroscopic anatomical parcellation of the MNI MRI single-subject brain. Neuroimage 15, 273–289 (2002)CrossRef
    8.Liu, J., Ji, S., Ye, J.: SLEP: Sparse learning with efficient projections. Arizona State University (2009)
    9.Van Essen, D.C., Smith, S.M., Barch, D.M., Behrens, T.E., Yacoub, E., Ugurbil, K.: WU-Minn HCP consortium. The WU-Minn human connectome project: an overview. Neuroimage 80, 62–79 (2013)CrossRef
    10.Lv, J., Jiang, X., Li, X., Zhu, D., Zhang, S., Zhao, S., Chen, H., Zhang, T., Hu, X., Han, J., Ye, J.: Holistic atlases of functional networks and interactions reveal reciprocal organizational architecture of cortical function. IEEE Trans. Biomed. Eng. 62, 1120–1131 (2015)CrossRef
    11.Smith, S., Fox, P., Miller, K., Glahn, D., Fox, P., Mackay, C., Filippini, N., Watkins, K., Toro, R., Laird, A., Beckmann, C.: Correspondence of the brain’s functional architecture during activation and rest. Proc. Natl. Acad. Sci. U.S.A. 106, 13040–13045 (2009)CrossRef
  • 作者单位:Qinghua Zhao (18) (20)
    Jianfeng Lu (18)
    Jinglei Lv (19) (20)
    Xi Jiang (20)
    Shijie Zhao (19) (20)
    Tianming Liu (20)

    18. School of Computer Science and Engineering, Nanjing University of Science and Technology, Nanjing, China
    20. Cortical Architecture Imaging and Discovery, Department of Computer Science and Bioimaging Research Center, The University of Georgia, Athens, GA, USA
    19. School of Automation, Northwestern Polytechnical University, Xi’an, China
  • 丛书名:Medical Image Computing and Computer-Assisted Intervention ¨C MICCAI 2016
  • ISBN:978-3-319-46720-7
  • 刊物类别:Computer Science
  • 刊物主题:Artificial Intelligence and Robotics
    Computer Communication Networks
    Software Engineering
    Data Encryption
    Database Management
    Computation by Abstract Devices
    Algorithm Analysis and Problem Complexity
  • 出版者:Springer Berlin / Heidelberg
  • ISSN:1611-3349
  • 卷排序:9900
文摘
Investigating functional brain networks and activities using sparse representation of fMRI data has received significant interests in the neuroimaging field. It has been reported that sparse representation is effective in reconstructing concurrent and interactive functional brain networks. However, previous data-driven reconstruction approaches rarely simultaneously take consideration of anatomical structures, which are the substrate of brain function. Furthermore, it has been rarely explored whether structured sparse representation with anatomical guidance could facilitate functional networks reconstruction. To address this problem, in this paper, we propose to reconstruct brain networks using the anatomy-guided structured multi-task regression (AGSMR) in which 116 anatomical regions from the AAL template as prior knowledge are employed to guide the network reconstruction. Using the publicly available Human Connectome Project (HCP) Q1 dataset as a test bed, our method demonstrated that anatomical guided structure sparse representation is effective in reconstructing concurrent functional brain networks.

© 2004-2018 中国地质图书馆版权所有 京ICP备05064691号 京公网安备11010802017129号

地址:北京市海淀区学院路29号 邮编:100083

电话:办公室:(+86 10)66554848;文献借阅、咨询服务、科技查新:66554700