Fatty acid biosynthesis in eukaryotic photosynthetic microalgae: Identification of a microsomal delta 12 desaturase in Chlamydomonas reinhardtii
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  • 作者:Xiaoyuan Chi (1) (2)
    Xiaowen Zhang (1) (2)
    Xiangyu Guan (3)
    Ling Ding (1) (2)
    Youxun Li (1) (2)
    Mingqing Wang (3)
    Hanzhi Lin (1) (2)
    Song Qin (1)
  • 关键词:fatty acid desaturase ; eukaryotic photosynthetic microalgae ; Chlamydomonas reinhardtii
  • 刊名:Journal of Microbiology
  • 出版年:2008
  • 出版时间:April 2008
  • 年:2008
  • 卷:46
  • 期:2
  • 页码:189-201
  • 全文大小:868KB
  • 参考文献:1. Armbrust, E.V., J.A. Berges, C. Bowler, B.R. Green, D. Martinez, N.H. Putnam, S. Zhou, A.E. Allen, K.E. Apt, M. Bechner, M.A. Brzezinski, B.K. Chaal, A. Chiovitti, A.K. Davis, M.S. Demarest, J.C. Detter, T. Glavina, D. Goodstein, M.Z. Hadi, U. Hellsten, / et al. 2004. The genome of the diatom / Thalassiosira pseudonana: Ecology, evolution, and metabolism. / Science 306, 79-6. CrossRef
    2. Chretiennot-Dinet, M.J., C. Courties, A. Vaquer, J. Neveux, H. Claustre, J. Lautier, and M.C. Machado. 1995. A new marine picoeucaryote: / Ostreococcus tauri gen. et sp. nov. (Chlorophyta, Prasinophyceae). / Phycologia 34, 285-92.
    3. De Luca, P., R. Taddei, and L. Varano. 1978. / Cyanidioschyzon merolae: a new alga of thermal acidic environments. / Webbia 33, 37-4.
    4. Delwiche, C.F. and J.D. Palmer. 1997. The origin of plastids and their spread via secondary symbiosis, p. 53-6. / In D. Bhattacharya (ed.), Origins of Algae and their plastids. Springer-Verlag, Vienna, Austria.
    5. Derelle, E., C. Ferraz, P. Lagoda, S. Eychenié, R. Cooke, F. Regad, X. Sabau, C. Courties, M. Delseny, J. Demaille, A. Picard, and H. Moreau. 2002. DNA libraries for sequencing the genome of / Ostreococcus tauri (Chlorophyta, Prasinophyceae): the smallest free-living eukaryotic cell. / J. Phycol. 38, 1150-156. CrossRef
    6. Derelle, E., C. Ferraz, S. Rombauts, P. Rouze, A.Z. Worden, S. Robbens, F. Partensky, S. Degroeve, S. Echeynie, R. Cooke, Y. Saeys, J. Wuyts, K. Jabbari, C. Bowler, O. Panaud, B. Piégu, S.G. Ball, J.-P. Ral, F.-Y. Bouget, G. Piganeau, / et al. 2006. Genome analysis of the smallest free-living eukaryote / Ostreococcus tauri unveils many unique features. / Proc. Natl. Acad. Sci. USA 103, 11647-1652. CrossRef
    7. Domergue, F., A. Abbadi, U. Z?hringer, H. Moreau, and E. Heinz. 2005. / In vivo characterization of the first acyl-CoA Δ6-desaturase from a member of the plant kingdom, the microalga / Ostreococcus tauri. / Biochem. J. 389, 483-90. CrossRef
    8. Domergue, F., P. Spiekermann, J. Lerchl, C. Beckmann, O. Kilian, P.G. Kroth, W. Boland, U. Z?hringer, and E. Heinz. 2003. New insight into / Phaeodactylum tricornutum fatty acid metabolism. cloning and functional characterization of plastidial and microsomal Δ12-fatty acid desaturases. / Plant Physiology 131, 1648-660. CrossRef
    9. Falkowski, P.G., M.E. Katz, A.H. Knoll, A. Quigg, J.A. Raven, O. Schofield, and F.J. Taylor. 2004. The evolution of modern eukaryotic phytoplankton. / Science 305, 354-60. CrossRef
    10. Harris, E.H. 1989. The Chlamydomonas sourcebook: a comprehensive guide to biology and laboratory use, p. 31-2. Academic Press, San Diego, USA.
    11. Horrobin, D.F. 1992. Nutritional and medical importance of gamma-linoleic acid. / Prog. Lipid Res. 31, 163-94. CrossRef
    12. Gibbs, S.P. 1981. The chloroplasts of some algal groups may have evolved from endosymbiotic eukaryotic algae. / Ann. NY Acad. Sci. 361, 193-08. CrossRef
    13. Giroud, C. and W. Eichenberger. 1989. Lipids of / Chlamydomonas reinhardtii. Incorporation of [14C]acetate, [14C]palmitate and [14C]oleate into different lipids and evidence for lipid-linked desauration of fatty acids. / Plant Cell Physiol. 30, 121-28.
    14. Giroud, C., A. Gerber, and W. Eichenberger. 1988. Lipids of / Chlamydomonas reinhardtii. Analysis of molecular species and intracellular site(s) of biosynthesis. / Plant Cell Physiol. 29, 587-95.
    15. Grima, E.M., A.R. Medina, A.G. Giménez, and M.J.I. González. 1996. Gram-scale purification of eicosapentaenoic acid (EPA, 20: 5n-3) from wet / Phaeodactylum tricornutum UTEX 640 biomass. / J. Appl. Phycol. 8, 359-67. CrossRef
    16. Grossman, A.R. 2005. Paths toward algal genomics plant. / Physiology 137, 410-27.
    17. Kajikawa, M., K.T. Yamato, Y. Kohzu, S. Shoji, K. Matsui, Y. Tanaka, Y. Sakai, and H. Fukuzawa. 2006. A front-end desaturase from / Chlamydomonas reinhardtii produces pinolenic and coniferonic acids by ω13 desaturation in methylotrophic yeast and tobacco. / Plant Cell Physiol 47, 64-3. CrossRef
    18. Merchant, S.S., S.E. Prochnik, O. Vallon, E.H. Harris, S.J. Karpowicz, G.B. Witman, A. Terry, A. Salamov, L.K. Fritz-Laylin, L. Maréchal-Drouard, W.F. Marshall, L.H. Qu, D.R. Nelson, A.A. Sanderfoot, M.H. Spalding, V.V. Kapitonov, Q. Ren, P. Ferris, E. Lindquist, H. Shapiro, / et al. 2007. The Chlamydomonas genome reveals the evolution of key animal and plant functions. / Science 318, 245-50. CrossRef
    19. Meyer, A., P. Cirpus, C. Ott, R. Schlecker, U. Z?hringer, and E. Heinz. 2003. Biosynthesis of docosahexaenoic acid in / Euglena gracilis: biochemical and molecular evidence for the involvement of a Δ4-fatty acyl group desaturase. / Biochemistry 42, 9779-788. CrossRef
    20. Misumi, O., M. matsuzaki, H. Nozaki, S. Miyagishima, T. Mori, K. Nishida, F. Yagisawa, Y. Yoshida, H. Kuroiwa, and T. Kuroiwa. 2005. / Cyanidioschyzon merolae genome. A tool for facilitating comparable studies on organelle biogenesis in photosynthetic eukaryotes. / Plant Physiology 137, 567-85. CrossRef
    21. Murphy, D.J. 1999. Production of novel oils in plants. / Curr. Opin. Biotechnol. 10, 175-80. CrossRef
    22. Nozaki, H., M. Matsuzaki, M. Takahara, O. Misumi, H. Kuroiwa, M. Hasegawa, T. Shin-I, Y. Kohara, N. Ogasawara, and T. Kuroiwa. 2003. The phylogenetic position of red algae revealed by multiple nuclear genes from mitochondria-containing eukaryotes and an alternative hypothesis on the origin of plastids. / J. Mol. Evol. 56, 485-97. CrossRef
    23. Palenik, B., J. Grimwood, A. Aerts, P. Rouzé, A. Salamov, N. Putnam, C. Dupont, R. Jorgensen, E. Derelle, S. Rombauts, K. Zhou, R. Otillar, S.S. Merchant, S. Podell, T. Gaasterland, C. Napoli, K. Gendler, A. Manuell, V. Tai, O. Vallon, / et al. 2007. The tiny eukaryote / Ostreococcus provides genomic insights into the paradox of plankton speciation. / PNAS 104, 7705-710. CrossRef
    24. Sato, N., S. Fujiwara, A. Kawaguchi, and M. Tsuzuki. 1997. Cloning of a gene for chloroplast Δ6 desaturase of a green alga, / Chlamydomonas reinhardtii. / J. Biochem. 122, 1224-232.
    25. Sato, N. and T. Moriyama. 2007. Genomic and biochemical analysis of lipid biosynthesis in the unicellular Rhodophyte / Cyanidioschyzon merolae: Lack of a plastidic desaturation pathway results in the coupled pathway of galactolipid synthesis. / Eukaryotic Cell 6, 1006-017. CrossRef
    26. Scala, S. and C. Bowler. 2001. Molecular insights into the novel aspects of diatom biology. / Cell Mol. Life Sci. 58, 1666-673. CrossRef
    27. Scala, S., N. Carels, A. Falciatore, M.L. Chiusano, and C. Bowler. 2002. Genome properties of the diatom / Phaeodactylum tricornutum. / Plant Physiology 129, 993-002. CrossRef
    28. Seckbach, J. 1994. The first eukaryotic cells-acid hot-spring algae. / J. Biol. Physics 20, 335-45. CrossRef
    29. Shanklin, J. and E.B. Cahoon. 1998. Desaturation and related modifications of fatty acids. / Annu. Rev. Plant Physiol. Plant Mol. Biol. 49, 611-41. CrossRef
    30. Somerville, C. and J. Browse. 1996. Dissecting desaturation: plants prove advantageous. / Trends Cell Biol. 6, 148-53. CrossRef
    31. Sperling, P., P. Ternes, T.K. Zank, and E. Heinz. 2003. The evolution of desaturases. / Prostaglandins Leukot. Essent. Fatty Acids 68, 73-5. CrossRef
    32. Thompson, J.D., D.G. Higgins, and T.J. Gibson. 1994. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. / Nucleic Acids Res. 22, 4673-680. CrossRef
    33. Tono, T., D. Harvey, T.R. Larson, and I.A. Graham. 2002. Long chain polyunsaturated fatty acid production and partitioning to triacylglycerols in four microalgae. / Phytochemistry 61, 15-4. CrossRef
    34. Tonon, T., O. Sayanova, L.V. Michaelson, R. Qing, D. Harvey, T.R. Larson, Y. Li, J.A. Napier, and I.A. Graham. 2005. Fatty acid desaturases from the microalga / Thalassiosira pseudonana. / Graham FEBS J. 272, 3401-412. CrossRef
    35. Yoon, H.S., K.M. Müller, R.G. Sheath, F.D. Ott, and D. Bhattacharya. 2006. Defining the major lineages of red algae (Rhodophyta). / J. Phycol. 42, 482-92. CrossRef
  • 作者单位:Xiaoyuan Chi (1) (2)
    Xiaowen Zhang (1) (2)
    Xiangyu Guan (3)
    Ling Ding (1) (2)
    Youxun Li (1) (2)
    Mingqing Wang (3)
    Hanzhi Lin (1) (2)
    Song Qin (1)

    1. Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, P. R. China
    2. Graduate University, Chinese Academy of Sciences, Beijing, 100039, P. R. China
    3. College of Marine Life Science, Faculty of Life Science and Technology, Ocean University of China, Qingdao, 266003, P. R. China
文摘
Polyunsaturated fatty acids (PUFAs) are important components of infant and adult nutrition because they serve as structural elements of cell membranes. Fatty acid desaturases are responsible for the insertion of double bonds into pre-formed fatty acid chains in reactions that require oxygen and reducing equivalents. In this study, the genome-wide characterization of the fatty acid desaturases from seven eukaryotic photosynthetic microalgae was undertaken according to the conserved histidine-rich motifs and phylogenetic profiles. Analysis of these genomes provided insight into the origin and evolution of the pathway of fatty acid biosynthesis in eukaryotic plants. In addition, the candidate enzyme from Chlamydomonas reinhardtii with the highest similarity to the microsomal Δ12 desaturase of Chlorella vulgaris was isolated, and its function was verified by heterologous expression in yeast (Saccharomyces cerevisiae).

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