Variability of cytochrome b gene and adjacent part of tRNA-Thr gene of mitochondrial DNA in the northern mole vole Ellobius talpinus (Mammalia, Rodentia)

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• 作者：A. S. Bogdanov ; V. S. Lebedev ; A. E. Zykov…
• 关键词：the Northern mole vole E. talpinus ; intraspecific genetic variability and differentiation ; mitochondrial DNA ; cytochrome b gene
• 刊名：Russian Journal of Genetics
• 出版年：2015
• 出版时间：December 2015
• 年：2015
• 卷：51
• 期：12
• 页码：1243-1248
• 全文大小：277 KB
• 参考文献：1.Toews, D.P.L. and Brelsford, A., The biogeography of mitochondrial and nuclear discordance in animals, Mol. Ecol., 2012, vol. 21, pp. 3907-930. doi 10.1111/j.1365-294X.2012.05664xCrossRef PubMed
  2.Bogdanov, A.S., Stakheev, V.V., Zykov, A.E., et al., Genetic variation and differentiation of wood mice from the genus Sylvaemus inferred from sequencing of the cytochrome oxidase subunit 1 gene fragment, Russ. J. Genet., 2012, vol. 48, no. 2, pp. 186-98. doi 10.1134/S1022795412020044CrossRef
  3.Bogdanov, A.S., Saidov, A.S., and Marochkina, V.V., Genetic variation and differentiation of wood mice (Sylvaemus, Muridae) of South Western Tien Shan and Pamir-Alai and the Himalayas: results of analysis of heterochromatin and the mitochondrial gene fragment of the first cytochrome oxidase subunit, in Nazemnye pozvonochnye zhivotnye aridnykh ekosistem (Terrestrial Vertebrates of Arid Ecosystems) (Proc. Int. Conf. in Memoriam of N.A. Zarudnyi), Tashkent: CHINOR ENK, 2012, pp. 64-4.
  4.Grechko, V.V., The problems of molecular phylogenetics with the example of squamate reptiles: mitochondrial DNA markers, Mol. Biol. (Moscow), 2013, vol. 47, no. 1, pp. 55-4. doi 10.1134/S0026893313010056CrossRef
  5.Ognev, S.I., Zveri SSSR i prilezhashchikh stran: gryzuny (Animals of the Soviet Union and Neighboring Countries: Rodents), Moscow: Akad. Nauk SSSR, 1950, vol. 7.
  6.Ellerman, J.R. and Morrison-Scott, T.C.S., Checklist of Palaearctic and Indian Mammals, 1758 to 1946, London, 1951.
  7.Corbet, G.B., The Mammals of the Palearctic Region: A Taxonomic Review, London: Cornell Univ. Press, 1978.
  8.Yakimenko, L.V. and Vorontsov, N.N., Morphotipic variation of karyologically differentiated mole vole populations from superspecies Ellobius talpinus, in Fenetika populyatsii (Phenetics of Populations), Yablokov, A.V., Ed., Moscow: Nauka, 1982, pp. 276-89.
  9.Yakimenko, L.V., Cytogenetic and morphological differentiation of mole voles from superspecies Ellobius talpinus Pall., Extended Abstract of Cand. Sci. Dissertation, Vladivostok, Moscow: Inst. Biol. Razvit., 1984.
  10.Yakimenko, L.V. and Lyapunova, E.A., Cytogenetic confirmation of affiliation of Northern mole voles from Turkmenistan to the species Ellobius talpinus s. str. (Rodentia, Cricetidae), Zool. Zh., 1986, vol. 65, no. 6, pp. 946-48.
  11.Bakloushinskaya, I.Yu., Romanenko, S.A., Grafodatskii, A.S., et al., The role of chromosome rearrangements in the evolution of mole voles of the genus Ellobius (Rodentia, Mammalia), Russ. J. Genet., 2010, vol. 46, no. 9, pp. 1143-145. doi 10.1134/ S1022795410090346CrossRef
  12.Pavlinov, I.Ya. and Lisovskii, A.A., Mlekopitayushchie Rossii: sistematiko-geograficheskii spravochnik (Mammals of Russia: Systematic and Geographic Reference Book), Moscow: KMK, 2012.
  13.Vogel, W., Jainta, S., Rau, W., et al., Sex determination in Ellobius lutescens: the story of an enigma, Cytogenet. Cell Genet., 1998, vol. 80, pp. 214-21. doi 10.1159/000014983CrossRef PubMed
  14.Romanenko, S.A., Sitnikova, N.A., Serdukova, N.A., et al., Chromosomal evolution of Arvicolinae (Cricetidae, Rodentia). II. The genome homology of two mole voles (genus Ellobius), the field vole and golden hamster revealed by comparative chromosome painting, Chromosome Res., 2007, vol. 15, no. 7, pp. 891-97. doi 10.1007/s10577-007-1l71-9CrossRef PubMed
  15.Bakloushinskaya, I.Yu., Matveevsky, S.N., Romanenko, S.A., et al., A comparative analysis of the mole vole sibling species Ellobius tancrei and E. talpinus (Cricetidae, Rodentia) through chromosome painting and examination of synaptonemal complex structures in hybrids, Cytogenet. Genome Res., 2012, vol. 136, pp. 199-07. doi 10.1159/000336459CrossRef PubMed
  16.Ivanov, V.G., Chromosomal complex of the common mole vole, Tsitologiya, 1967, vol. 9, no. 7, pp. 879-83.
  17.Lyapunova, E.A., Ivnitskii, S.B., Korablev, V.P., and Yanina, I.Yu., Full Robertsonian fan of chromosomal forms of mole voles of the supergenus Ellobius, Dokl. Akad. Nauk SSSR, 1984, vol. 274, no. 5, pp. 1209-213.
  18.Lyapunova, E.A., Bakloushinskaya, I.Yu., Saidov, A.S., and Saidov, K.Kh., Dynamics of chromosome variation in mole voles Ellobius tancrei (Mammalia, Rodentia) in Pamiro-Alay in the period from 1982 to 2008, Russ. J. Genet., 2010, vol. 46, no. 5, pp. 566-71. doi 10.1134/S1022795410050091CrossRef
  19.Bakloushinskaya, I., Romanenko, S., Serdukova, N., et al., A new form of the mole vole Ellobius tancrei Blasius, 1884 (Mammalia, Rodentia) with the lowest chromosome number, Comp. Cytogenet., 2013, vol. 7, no. 2, pp. 163-69. doi 10.3897/CompCytogenv7i2.5350PubMedCentral CrossRef PubMed
  20.Vorontsov, N.N. and Radzhabli, S.I., Chromosomal sets and cytogenetic differentiation of two forms of mole voles from the Ellobius talpinus Pall. superspecies, Tsitologiya, 1967, vol. 9, no. 7, pp. 848-52.
  21.Abramson, N.I., Lebedev, V.S., Tesakov, A.S., and Bannikova, A.A., Supraspecies relationships in the subfamily Arvic
• 作者单位：A. S. Bogdanov (1)
  V. S. Lebedev (2)
  A. E. Zykov (3)
  I. Yu. Bakloushinskaya (1)
  
  1. Koltzov Institute of Developmental Biology, Russian Academy of Sciences, Moscow, 119334, Russia
  2. Zoological Museum, Lomonosov Moscow State University, Moscow, 125009, Russia
  3. National Museum of Natural History, National Academy of Sciences of Ukraine, Kiev, 01601, Ukraine
  
• 刊物类别：Biomedical and Life Sciences
• 刊物主题：Biomedicine
  Human Genetics
  Animal Genetics and Genomics
  Microbial Genetics and Genomics
  Russian Library of Science
  
• 出版者：MAIK Nauka/Interperiodica distributed exclusively by Springer Science+Business Media LLC.
• ISSN：1608-3369

文摘

The Northern mole vole E. talpinus, despite its wide distribution, is characterized by a stable karyotype (2n = NF = 54) and slight morphological polymorphism. We made a preliminary analysis of a mitochondrial DNA fragment to clarify the level of genetic variation and differentiation of E. talpinus The complete cytochrome b gene (cyt b, 1143 bp) and a short part of its flanking gene tRNA-Thr (27 bp) were sequenced. We studied 16 specimens of E. talpinus from eight localities, including Crimea, the Volga region, the Trans-Volga region, the Southern Urals, Western Siberia, and Eastern Turkmenistan. Mitotypes of E. talpinus were distributed on a ML dendrogram as four distinct clusters: the first (I) contains specimens from the Crimea, the second (II) combines individuals from the Volgograd region, the left bank of the Don River; the third (III) includes those from the Trans-Volga region, Southern Urals, the left bank of the Irtysh River, and Eastern Turkmenistan; the fourth (IV) are those from the right bank of the Irtysh River. These clusters were relatively distant from each other: the mean genetic distances (D) between them are 0.021-.051. The Eastern mole vole E. tancrei differed from E. talpinus population groups 1.5- times more (D = 0.077-.084) than the latters did among themselves. Such variations indirectly proved the unity of E. talpinus, despite its high intraspecific differentiation for the studied fragment of mitochondrial DNA. This differentiation apparently occurred because of the long isolation of E. talpinus population groups by geographic barriers, in particular, the large rivers that completely separate the species range meridionally (the Volga River, the Irtysh River). Sociality and underground lifestyle could accelerate the fixation of mutations in disjunct populations. The composition and distribution of intraspecific groups of E. talpinus, which were identified in analysis of the mitochondrial DNA fragment, do not coincide with the subspecies taxonomy. The subspecies E. t. talpinus is actually a complex taxon, including two or three genetically discrete forms (III, IV, and probably II). Moreover, one of the forms (III) occupies the territory where three subspecies, E. t. talpinus, E. t. rufescens, and E. t. transcaspiae, were described. Keywords the Northern mole vole E. talpinus intraspecific genetic variability and differentiation mitochondrial DNA cytochrome b gene