9311与日本晴间一个杂种不育基因的鉴定与定位
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  • 英文篇名:Identification and Mapping of a Hybrid Sterility Gene between 9311 and Nipponbare
  • 作者:张宏根 ; 张丽佳 ; 孙一标 ; 司华 ; 刘巧泉 ; 汤述翥 ; 顾铭洪
  • 英文作者:ZHANG Hong-Gen;ZHANG Li-Jia;SUN Yi-Biao;SI Hua;LIU Qiao-Quan;TANG Shu-Zhu;GU Ming-Hong;Jiangsu Key Laboratory of Crop Genetics and Physiology, Co-Innovation Center for Modern Production Technology of Grain Crops, Key Laboratory of Plant Functional Genomics of the Ministry of Education, Yangzhou University;
  • 关键词:水稻 ; 杂种不育基因 ; 基因定位
  • 英文关键词:Rice;;Hybrid sterility gene;;Gene mapping
  • 中文刊名:XBZW
  • 英文刊名:Acta Agronomica Sinica
  • 机构:扬州大学江苏省作物遗传生理国家重点实验室培育点/粮食作物现代产业技术协同创新中心/教育部植物功能基因组学重点实验室;
  • 出版日期:2016-03-22 16:00
  • 出版单位:作物学报
  • 年:2016
  • 期:v.42
  • 基金:国家重点基础研究发展计划项目(2011CB100101);; 江苏高校优势学科建设工程项目资助~~
  • 语种:中文;
  • 页:XBZW201606004
  • 页数:8
  • CN:06
  • ISSN:11-1809/S
  • 分类号:10-17
摘要
以克服亚种间杂种不育来充分发掘亚种间杂种优势是提高水稻单产的一条有效途径。本研究从一套以日本晴为背景、9311为供体的染色体片段代换系中鉴定出一个系T9424,其与日本晴配置的F_1植株小穗与花粉育性较双亲显著降低,双亲间存在不亲和。重测序结果表明T9424在第1、第4和第5染色体上导入9311片段。日本晴/T9424F_2群体内单株基因型及育性鉴定结果表明,T9424与日本晴间杂种不育基因位于第5染色体上。利用F_2群体内790株单株将该杂种不育基因定位于第5染色体分子标记PSM8与A14之间110 kb的物理区段内。对日本晴/T9424 F_1植株花粉与胚囊育性鉴定结果表明该杂种不育基因同时控制雌、雄配子败育,将该基因暂命名为S39(t)。相关结果有助于加深对水稻亚种间杂种不育现象的认识,为该基因克隆及其育种利用奠定基础。
        Exploitation of subspecific heterosis is an effective method to improve rice yield by overcoming hybrid sterility between subspecies. In this study, F_1 plants of the cross between Nipponbare and T9424, a line from a set of chromosome segment substitution lines with Nipponbare background as recipient and 9311 as donor, showed the decreasing spikelet and pollen fertility compared with the two parents, indicating that there was the incompatibility between the parents. Three substituted chromosome segments on chromosome 1, 4, and 5, respectively, were identified by whole genome re-sequencing of T9424. Analysis of the genotypes and spikelet fertility of plants in Nipponbare/T9424 F_2 population indicated that hybrid sterility gene between T9424 and Nipponbare was located on chromosome 5. A total of 790 plants were then used for mapping the hybrid sterility gene, and the target gene was mapped to a candidate region with the physical distance of 110 kb between PSM8 and A14 on chromosome 5. The hybrid sterility gene, named S39(t) temporarily, controlled partial abortion of both pollen grains and embryo-sac of Nipponbare/T9424 F_1 plants. These results are useful for deepening understanding of the phenomenon of hybrid sterility, and lay the groundwork for the gene cloning and its use in breeding.
引文
[1]Sano Y.Sterility barriers between Oryza sativa and O.glaberrima.In:International Rice Research Institute,eds.Rice Genetics.Manila:International Rice Research Institute,1986.pp 109-118
    [2]Orr H A,Presgraves D C.Speciation by postzygotic isolation:forces,genes and molecules.Bioessays,2000,22:1085-1094
    [3]何光华,郑家奎,阴国大,杨正林.水稻亚种间杂种配子育性的研究.中国水稻科学,1994,8:177-180He G H,Zheng J K,Yin G D,Yang Z L.Game fertility of F1between indica and japonica.Chin J Rice Sci,1994,8:177-180(in Chinese with English abstract)
    [4]王才林,张兆兰,汤述翥,施建达.三系法籼粳亚种间杂种优势利用研究:I.籼粳交不育与细胞质雄性不育的区别及其检测.江苏农业学报,1992,8(3):1-7Wang C L,Zhang Z L,Tang S Z,Shi J D.Exploitation of heterosis between indica and japonica by three-line method I differentiation between indica-japonica sterility and cytoplasmic male sterility.Jiangsu J Agric Sci,1992,8(3):1-7(in Chinese with English abstract)
    [5]Sano Y,Sano R.Variation of the intergenic spacer region of ribosomal DNA in cultivated and wild rice species.Genome,1990,33:209-218
    [6]Maekawa M,Inuaki T,Shinbashi N.Spikelet sterility in F1hybrids between rice varieties Silewah and Hayakogane.Ikushugaku Zasshi,1991,41:359-363
    [7]马生健,刘耀光,刘金祥.水稻的杂种不育研究进展.植物遗传资源学报,2014,15:1080-1088Ma S J,Liu Y G,Liu J X.Research progress of hybrid sterility of rice.J Plant Genet Resour,2014,15:1080-1088(in Chinese with English abstract)
    [8]陆驹飞,严长杰,汤述翥,朱立煌,顾铭洪.云南水稻品种花糯广亲和性的遗传分析.扬州大学学报(自然科学版),1998,1(4):31-35Lu J F,Yan C J,Tang S Z,Zhu L H,Gu M H.Genetic analysis of the wide compatiblity of rice variety Huanuo from Yunnan province.J Yangzhou Univ(Nat Sci),1998,1(4):31-35(in Chinese with English abstract)
    [9]Yao S Y,Henderson M T,Jodon N E.Cryptic structural hybridity as a probable cause of sterility in inter-varietal hybrids of cultivated rice,Oryza sativa L.Cytologia,1958,23:46-55
    [10]Oka H.Analysis of genes controlling F1 sterility in rice by the use of isogenic lines.Genetics,1974,77:521-534
    [11]Chen J J,Ding J H,Ou-Yang Y D,Du H Y,Yang J Y,Cheng K.Atriallelic system of S5 is a major regulator of the reproductive barrier and compatibility of indica-japonica hybrids in rice.Proc Natl Acad Sci USA,2008,105:11436-11441
    [12]田华.水稻籼粳亚种间杂种胚囊不育基因S7的精细定位及细胞学研究.南京农业大学硕士学位论文,江苏南京,2009Tian H.Cytological Studies and Gene Mapping of Intersubspecies Hybrid Embryo Sac Sterility Gene S7 of Rice(Oryza sativa L.).MS Thesis of Nanjing Agricultural University,Nanjing,China,2009(in Chinese with English abstract)
    [13]Singh S P,Sundaram R M,Biradar S K,Ahmed M L,Viraktamath B C,Siddiq E A.Identification of simple sequence repeat markers for utilizing wide-compatibility genes in inter-subspecific hybrids in rice(Oryza sativa L.).Theor Appl Genet,2006,113:509-517
    [14]Wan J,Yamaguchi Y,Kato H,Ikehashi H.Two new loci for hyb r i d sterility in cultivated rice(Oryza sativa L.).Theor Appl Genet,1996,92:183-190
    [15]Wan J,Ikehashi H.Identification of anew locus S16 causing hybrid sterility in native rice varieties(Oryza sativa L.)from Taihu Lake region and Yunnan province,China.Breed Sci,1995,45:461-470
    [16]Wan J M,Ikehashi H,Sakai M,Horisue H,Imbe T.Mapping of hybrid sterility gene S17 of rice(Oryza sativa L.)by isozyme and RFLP markers.Rice Genet Newsl,1998,15:151-154
    [17]Zhu S,Wang C,Zheng T,Zhao Z,Ikehashi H,Wan J.A new gene located on chromosome 2 causing hybrid sterility in a remote cross of rice.Plant Breed,2005,124:440-445
    [18]Zhu S S,Jiang L,Wang C M,Zhai H Q,Li D T,Wan J M.The origin of weedy rice Ludao in China deduced by genome wide analysis of its hybrid sterility genes.Breed Sci,2005,55:409-414
    [19]Zhao Z G,Jiang L,Zhang W W,Yu C Y,Zhu S S,Xie K,Tian H,Liu L L,Ikehashi H,Wan J M.Fine mapping of S31,a gene responsible for hybrid embryo-sac abortion in rice(Oryza sativa L.).Planta,2007,226:1087-1096
    [20]L i D T,Chen L M,Ling J,Zhu S S,Zhao Z G,Liu S J,Su N,Zhai H Q,Ikehashi H,Wan J M.Fine mapping of S32(t),a new gene causing hybrid embryo sac sterility in a Chinese landrace rice(Oryza sativa L.).Theor Appl Genet,2007,114:515-524
    [21]Chen M,Zhao Z,Jiang L,Wan J.A new gene controlling hybrid sterility in rice(Oryza sativa L.).Euphytica,2012,184:15-22
    [22]张桂权,卢永根.栽培稻(Oryza sativa)杂种不育性的遗传研究:I.等基因F1不育系杂种不育性的双列分析.中国水稻科学,1989,3:97-101Zhang G Q,Lu Y G.Genetic studies on the hybrid sterility in cultivated rice(Oryza sativa):I.Diallel analysis of the hybrid sterility among isogenic F1 sterile lines.Chin J Rice Sci,1989,3:97-101(in Chinese with English abstract)
    [23]张桂权,卢永根.栽培稻杂种不育性的遗传研究:II.F1花粉不育性的基因模式.遗传学报,1993,20:541-551Zhang G Q,Lu Y G.Genetic studies on the hybrid sterility in cultivated rice(Oryza sativa):II.A genic model for F1 pollen sterility.Acta Genet Sin,1993,20:222-228(in Chinese with English abstract)
    [24]张桂权,卢永根,张华,杨进昌,刘桂富.栽培稻(Oryza sativa)杂种不育性的遗传研究:IV.F1花粉不育性的基因型遗传.遗传学报,1994,21:34-41Zhang G Q,Lu Y G,Zhang H,Yang J C,Liu G F.Genetic studies on the hybrid sterility in cultivated rice(Oryza sativa):IV.Genotypes for F1 pollen sterility.Acta Genet Sin,1994,21:34-41(in Chinese with English abstract)
    [25]夏继星.水稻矮化突变体的分子遗传学分析和杂种不育基因S20的图位克隆.华南农业大学博士学位论文,广东广州,2008Xia J X.Genetic Analysis of a Rice Dwarf Mutant Z110-6 and Molecular Cloning of S20 for Hybrid Male Sterility in Rice.Ph DDissertation of South China Agricultural University,Guangzhou,China,2008(in Chinese with English abstract)
    [26]Takahiko K,Atsushi Y,Nori K.Hybrid male sterility in rice is due to epistatic interactions with a pollen killer locus.Genetics,2011,189:1083-1092
    [27]Win K T,Kubo T,Miyazaki Y,Doi K,Yamagata Y,Yoshimura A.Identification of two loci causing F1 pollen sterility in interand intraspecific crosses of rice.Breed Sci,2009,59:411-418
    [28]Long Y M,Zhao L F,Niu B X,Su J,Wu H,Chen Y L,Zhang Q Y,Guo J X,Zhuang C X,Mei M T,Xia J X,Wang L,Wu H B,Liu Y G.Hybrid male sterility in rice controlled by interaction between divergent alleles of two adjacent genes.Proc Natl Acad Sci USA,2008,105:18871-18876
    [29]Yamagata Y,Yamamoto E,Aya K,Win K T,Doi K,Sobrizal,Ito T,Kanamori H,Wu J Z,Matsumoto T,Matsuoka M,Ashikari M,Yoshimura A.Mitochondrial gene in the nuclear genome induces reproductive barrier in rice.Proc Natl Acad Sci USA,2010,107:1494-1499
    [30]Mizuta Y,Harushima Y,Kurata N.Rice pollen hybrid incompatibility caused by reciprocal gene loss of duplicated genes.Proc Natl Acad Sci USA,2010,107:20417-20422
    [31]Sano Y,Sano R.Variation of the intergenic spacer region of ribosomal DNA in cultivated and wild rice species.Genome,1990,33:209-218
    [32]Koide Y,Onishi K,Nishimoto D,Baruah A R,Kanazawa A,Sano Y.Sex-independent transmission ratio distortion system responsible for reproductive barriers between Asian and African rice species.New Phytol,2008,179:888-900
    [33]Sano Y,Sano R,Eiguchi M,Hirano H Y.Gamete eliminator adjacent to the wx locus as recealed by pollen analysis in rice.JHered,1994,85:310-312
    [34]Sano Y.Genetic comparisons of chromosome 6 between wild and cultivated rice.Jpn J Breed,1992,42:561-572
    [35]Zhang C Q,Hu B,Zhu K Z,Zhang H,Leng Y L,Tang S Z,Gu MH,Liu Q Q.QTL mapping for rice RVA properties using high-throughput re-sequenced chromosome segment substitution lines.Rice Sci,2013,20:407-414
    [36]赵世绪,杜中,凌祖铭.用子房整体透明法和微分干涉差显微镜研究水稻的胚胎发育.遗传,1993,15:33-33Zhao S X,Du Z,Ling Z M.The use of a whole clearing technique and differential interference contrast microscope for study on embryology of rice.Hereditas(Beijing),1993,15:33-33(in Chinese)
    [37]Murray M G,Thompson W F.Rapid isolation of high molecular weight plant DNA.Nucl Acid Res,1980,8:4321-4325
    [38]李文涛,曾瑞珍,张泽民,丁效华,张桂权.水稻F1花粉不育基因座S-b的精细定位.科学通报,2006,51:404-408Li W T,Zeng R Z,Zhang Z M,Ding X H,Zhang G Q.Fine mapping of F1 pollen sterility loci S-b in rice.Chin Sci Bull,2006,51:404-408(in Chinese)
    [39]Kubo T,Yoshimura A,Kurata N.Hybrid male sterility in rice is due to epist atic interactions with a pollen killer locus.Genetics,2011,18:1083-1092
    [40]Wang G W,He Y Q,Xu C G,Zhang Q.Fine mapping of f5-Du,a gene conferring wide-compatibility for pollen fertility in intersubspecific hybrids of rice(Oryza sativa L.).Theor Appl Genet,2006,112:382-387
    [41]Ikehashi H,Araki H.Varietal screening of compatibility types revealed in F1 fertility of distant crosses in rice.Ikushugaku Zasshi,1984,34:304-313
    [42]Zhang H,Zhao Q,Sun Z Z,Zhang C Q,Feng Q,Tang S Z,Liang G H,Gu M H,Han B,Liu Q Q.Development and highthroughput genotyping of substitution lines carrying the chromosome segments of indica 9311 in the background of japonica Nipponbare.J Genet Genomics,2011,38:603-611
    [43]Kitamura E.Studies on cytoplasmic sterility of hybrids in distantly related:varieties of rice(Oryza sativa L.).Jpn J Breed,1962,12:81-84

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