脑损伤基因差异表达与损伤时间推断的实验研究
详细信息    本馆镜像全文|  推荐本文 |  |   获取CNKI官网全文
摘要
目的:研究创伤性脑损伤早期基因表达谱与正常脑组织基因表达谱的差异,以期阐明脑损伤后早期基因表达的改变规律,阐明脑损伤发生发展的分子机制,从而为临床治疗提供帮助,同时为法医损伤时间推断研究寻找标志物提供帮助。
    方法:以大鼠自由落体损伤模型为对象,从损伤区脑组织和假手术对照组脑组织分别提取mRNA,经反转录成cDNA后与含有4096个随机基因的基因表达谱芯片杂交,杂交后的芯片经扫描仪扫描,并用GenePix3.0软件分析结果。
    结果:发现有124个差异表达基因或表达序列标签(Expression Sequence Tags ESTs);其中有46个基因和26个EST表达下调; 28个基因和24个EST表达上调;在这些表达有差异的基因中,有涉及细胞内信号传导、神经递质释放、参与炎症的蛋白、离子通道及其受体蛋白和参与炎症反应的蛋白等被发现。
    结论:创伤性脑损伤的发生发展涉及多个基因的改变;研究一个或少数几个基因很难解释其损伤后分子变化机制;基因芯片是研究颅脑损伤这种多基因改变、多因素作用的理想工具。
Objective:To study the expression levels of large number of genes and to identify genes not previously implicated in rat after traumatic brain injury,which may provide valuable information on therapies and may be helpful in search of forensic markers of vitality.
    Methods:The model of traumatic brain injury originally
    
    
    described by Feeney was employed with modification.Wistar rats were randomly divided into cortical impact injury group and shame operated control group.Each group comprised 12 Wistar rats. At 5 hours following cortical impact injury, animals were anaesthetised by intraperioneal injection of 4% chloral hydrate and sacrificed by decapitation .Then the brain tissue were dissected and stored in the liquid nitrogen until required for RNA isolation. The total RNA of tissues were extracted and the probes were prepared by reverse transcriptase reaction(RT)and then hybridized with cDNA microarray.
    Results:Of 4096 randomly selected arrayed genes or expressed sequence tags from a rat cDNA library,124 genes or expressed sequence tags were found to be differently expressed at 5 hours following cortical impact injury(28 genes and 24 ESTs were increased, and 46 genes and 26 ESTs were decreased);Genes involved in cell homeostasis such as Secretory leukocyte protease inhibitor, transthyretin and inflammatory response such as phospholipase A2,interliukin-1 were primarily up-regulated while those encoding mitochondrial enzymes(such as ATP synthase,ATP citrate lyase),metobolic molecules, calcium signaling protein ,and cellular structure protein(such as tublin) were predominantly down-regulated; Down-regulated
    
    
    genes were also seen in neutrophic factor/receptors(Ciliary neutrophic factor, Glial cell line-derived neutrophic factor ); Partly channels and transporters were down-regulated whereas partly channels and transporters were up-regulated at same time.To our best knowledge,A number of genes were found which have not been previously report in traumatic brain injury.
    Conclusions:The geneomic response to traumatic brain injury is complex and a great number of genes involved in this pathophysiological course. The molecular mechanism of traumatic brain injury could not be fully disclosed by investigating only one changes of a gene or a few genes.The microarray methods is an ideal tools for researching multi-genes involved diseases.
引文
江基尧,朱诚主编《现代颅脑损伤学》上海:第二军医大学出版社,1999.223-233;509-511
    Schena M,Shalon D,Davis R,et al. Quantitative monitoring of gene expression patterns with a complementary DNA microarry. Science 1995;270(20):467-470
    府伟灵,黄君富 生物芯片-21世纪的生物技术革命 [J]. 国外医学《临床生物化学与检验学分册》2002;23(1):1-2
    Golub T R,Slonim D K, Tamayo P,et al. Molecular classifiction of cancer: Class discovery and class prediction by gene expression mornitoring. Science 1999;286:5439:531-537
    王新德总主编《神经病学》第11卷,赵雅度主编,神经系统外伤 北京:人民军医出版社,2001
    易声禹,只达石主编《颅脑损伤诊治》北京:人民卫生出版社,2000
    Raivich G, Bohatschek M, Kloss C U A, et al. Neuroglial activation repertoire in the injured brain:graded response, molecular mechanisms and cues to physiological function. Brain Res Rev 1999;30:77-105
    Tomizawa K,He X P, Yamanaka H,et al. Injury induces neuropsin mRNA in the central nervous system. Brain Res 1999;824:308-311
    Muessel M J, Berman N E J, Klein R M. Early and specific expression of monocyte chemoattractant protein-1 in the thalamus induced by cortical injury. Brain Res.2000;870:211-221
    Morrison B Ⅲ, Meaney D F,McIntosh T K,et al. Mechanical charicterization of an in vitro device to quantitatively injure living brain tissue. Ann Biomed Eng 1998;26:381-390
    
    Matzilevich D A, Rall J M,Moore A N,et al.High density microarray analysis of hippcampal gene expression following experimental brain injury. J Neurosci Res ,2002;67:646-663
    Long Y,Zou L L,Liu H,et al.Altered expression of randomly selected genes in mouse hippcampus after traumatic brain injury. J Neurosci Res 2003,71:710-720
    Li M D,Kane J K,Matta S G,et al.Nicortin enhances the biosynthesis and secretion of transthyetin from the choroid plexus in rats:implication for beta-amyloid formation . J Neurosci Res ,2000;20:1318-1323
    Merched A, Serot J M, Visvikis S, et al.Apolipoprotein E,transthyetin and actin in the CSF of Alzheimer’s patients:relation with senile plaques and cytoskeleton biochemistry. FEBS. Lett 1998;425:225-228
    Zou L, Burmeister L A, Styren S D, et al. Up-regulation of type 2 iodothyronine deiodinase mRNA in reactive astrocytes following traumatic brain injury in the rats. J Neurochem. 1998;71:887-890
    Pemberton AD, Huntly J F, Miller H R P. Differential inhibition of mast cell chymases by Secretory leukocyte protease inhibitor. Biochimica et Biophysica Acta-General subject 1998;1379:29-34
    Hiemstra PS, Maassen RJ,Stolk J. Antibacterial activity of antileukoprotease. Infection and Immunity 1996;64 :4520-524.
    Shine N, Konopka K ,Duzgunes N,et al. The anti-HIV-1 activity associated with saliva. Journal of Dental Research. 1997 ;76 :634-40.
    Tomee JFC, Hiemstra PS, HeinzelWieland R, et al. Antileukoprotease: an endogenous protein in the innate mucosal defence against fungi. Journal of Infectious Diseases. 1997;176 :740-47.
    Jin FY, Nathan C, Radzioch D,et al. Secretory leukocyte protease inhibitor: a macrophage product induced by and antagonistic to bacterial lipopolysaccharide. Cell. 1997; 88: 417-26.
    Vivien D,Buisson AS . Serine protease inhibitors: novel therapeutic targets for stroke? J Cereb Blood Flow Metab 2000;20:755-764
    
    方石岗,杨继震 基质金属蛋白酶与组织创伤修复 中华创伤杂志1999;15(5):395-396
    Asheroft G S, Herrick SE, Tamuzzer RW, et al. Human ageing impairs injury-induced in vivo expression of tissue inhibtor of matrix metalloproteinases (TIMP)-1 and –2 proteins and mRNA. J Pathol. 1997;183:169-176
    Roy M, Sapolsky RM. The neuroprotective effects of virally-derived caspase inhibitors p35 and crmA following a necrotic insult. Neurobiol Dis. 2003;14(1):1-9
    Date T, Luo Z, Yamakawa M,et al. Myocardial expression of baculoviral p35 alleviates doxorubicin-induced cardiomyopathy in rats. Hum Gene Ther. 2003 Jul 1;14(10):947-57.
     Vogel P, Putten H, Popp E,et al. Improved resuscitation after cardiac arrest in rats expressing the baculovirus caspase inhibitor protein p35 in central neurons. Anesthesiology. 2003;99(1):112-21.
    晏晓梅。磷脂酶A2的表达调控及其在炎症和多器官衰竭发病进程中的意义。国外医学《临床生物化学与检验学分册》1996;17(5):209-212
    Nevalainen T J.Serum phospholipase A2 in inflammatory diseases. Clin. Chem. 1993; 39(12): 2453-2459
    李廷富,涂植光,康格非.颅内感染患者脑脊液中PLA2活性的研究。《陕西医学检验》2001;16(1):21-23
    Ross B M,Hudson C,Erlich J C,et al. PLA2 activity is increased in blood of patients with schizophrenia and bipolar disorer .Soc Neurosci Abstr 1995;21:1736-1739
    Lauritzen I,Heurteaux C,Lazdunski M. Expression of group Ⅱ phospholipase A2 in rat brai after sever forebrain ischemia and endotoxic shock. Brain Res 1994;651:353-356
    Farooqui AA, yang H C,Rosenberger T A,et al. phospholipase A2 in neurodegeneration.J Neurochem.1997;69:889-901
    Erich kaiser. Phospholipase A2:Its usefulness in laboratory diagnostics. Crit
    
    
    Rev. Clin. Lab. Sci. 1999;36:65-165
    Sapirsten A, Bonventre J V. Phosopholipase A2 :ischemic and toxic brain injury. Neurochem Res 2000;25:745-753
    Arai K, Ikegaya Y, Nakatani Y,et al. Phospholipase A2 mediates ischemic injury in the hippocampus: a regional difference of neuronal vulnerability. Eur-J-Neurosci. 2001 ; 13(12): 2319-23
    Larson R A, Naji M, Lombardi J V, et al. Adenoviral-mediated uteroglobin gene transfer inhibits neointimal hyperplasia after balloon injury in the carotid artery. J Vasc Surg 2000;32:1111-1117
    Sjodin A, Guo D, Sorhaug S, et al. Dysregulated secretoglobin expression in human lung cancers. Lung Cancer. 2003 Jul;41(1):49-56.
    Mukherjee AB, Kundu GC, Mantile-Selvaggi G, et al. Uteroglobin:a novel cytokine? Cell Mol Life Sci 1999;55:771-787
    Manitile G, Miele L, Cordclln-Micle E, et al. Human Clara cell 10-Kda protein is the counterpart of rabbit uteroglobin. J Biol Chem 1993;268:20343-20351
    Hirschberg DL,Moalem G, He J, et al. Accumulation of passively transferred primed T cells independently of their antigen specificity following central nervous system trauma. J Neuroimmunol 1998;89:88-96]
    Harrison C. A,Raftery M. J,Walsh J,et al. Oxidation Regulates the Inflammatory Properties of the Murine S100 Protein S100A8 J. Biol. Chem. 1999 ;274: 8561-8569
    Semprini S, Capon F, Tacconelli A, et al.Evidence for differential S100 gene over-expression in psoriatic patients from genetically heterogeneous pedigrees. Hum Genet. 2002; 111(4-5):310-3.
    Irmgard S, Thorey, Johannes R, et al. The Ca2+-binding Proteins S100A8 and S100A9 Are Encoded by Novel Injury-regulated Genes. J. Biol. Chem. 2001; 276, 38: 35818-35825
    Ryckman C, Vandal K, Rouleau P,et al. Proinflammatory activities of S100: proteins S100A8, S100A9, and S100A8/A9 induce neutrophil
    
    
    chemotaxis and adhesion. J Immunol. 2003; 170(6):3233-42
    Arai K, Teratani T, Nozawa R,et al. Immunohistochemical investigation of S100A9 expression in pulmonary adenocarcinoma: S100A9 expression is associated with tumor differentiation. Oncol Rep. 2001;8(3):591-6
    Bailey C H,Bartsh D, Kandel E R. Toward a molecular definition of long-term memory storage. Proc Nad Acad Sci 1996;93:13445-13452
    Sassone-Corsi P. Transcription factors responsive to cAMP. Ann Rev Cell Dev Biol 1995;11:355-377
    Pike B R, Zhao X, Newcomb J K,et al. Regional calpin and caspase-3 proteolysis of alpha-spectrin after traumatic brain injury .Neuroreport 1998;9:2437-2442
    Posmantur R,Hayes R L, Dixon C E,et al. Nerofilament68 and neurofilament 200 protein levels decrease after traumatic brain injury. J Neurotrauma.1994;11:533-545
    Dash P K, Mach S A, Moore A N. Enhanced neurogenesis in the rodent hippocampus following traumatic brain injury. J Neurosci Res 2001;63:313-319
    David A, Matzilevich, Jason M, et al.High-density microarray analysis of hippocampal gene expression following experimental brain injury. J Neurosci Res 2002;67:646-663
    Li L, Chin LS. The molecular machinery of synaptic vesicle exocytosis. Cell Mol Life Sci. 2003 May;60(5):942-60.
    Leonard L, Jones,Zhiqiang L, et al. Regulation of the cell adhesion molecule CD44 after transeaction and direct trauma to the mouse brain. J Compra Neuro 2000;426:468-492
    Tang X, Zhang J, Cai Y,et al. Sperm membrane protein (hSMP-1) and RanBPM complex in the microtubule-organizing centre. J Mol Med. 2004 Mar 10; 212-216
    Klinefelter G R,Welch J E,Perreault S D,et al. Localization of the sperm protein SP22 and inhibition of fertility in vivo and in vitro. J Androl. 2002
    
    
    Jan-Feb; 23(1): 48-63
    Montero-Hadjadje M, Pelletier G, Yon L,et al. Biochemical characterization and immunocytochemical localization of EM66, a novel peptide derived from secretogranin II, in the rat pituitary and adrenal glands. J Histochem Cytochem. 2003 Aug;51(8):1083-95.
    Fischer-Colbrie R, Laslop A, Kirchmair R. Secretogranin II: molecular properties, regulation of biosynthesis and processing to the neuropeptide secretoneurin. Prog Neurobiol 1995;46:49-70.
    Zhang Q P,Skepper J N, Yang F T,et al. Nesprin:a novel family of spectrin-repeat containing proteins that localize to the nuclear membrane in multiple tissues. J Cell Sci 2001;114:4485-4496
    Bonne G,Barletta D, Varnous M R, et al. Mutation in the gene encoding lamin A/C cause autosomal dominant Emery-dreifuss muscular dystrophy. Nat Genet 1999;21:285-288
    Fatkin D,MacRae C,Sasaki T,et al. Missens mutation in the rod domain of the lamin A/C gene as cause of dialated cardiomyopathy and conduction-system disease. N Engl J Med 1999;341:1715-1724
    Muchir A, Bonne G, van der Kooi,et al. Identification of mutations in the genes encoding lamins A/C in autosomal dominant limb girdle muscular dystrophy with atrioventicular conduction disturbances (LGMDIB) Hum Mol Genet 2000;9:1453-1459
    McEnery MW, Dawson TM, Verma A,et al. Mitochondrial voltage-dependent anion channel. Immunochemicaland immunohistochemical characterization in rat brain. J Biol Chem. 1993 Nov 5;268(31):23289-96.
    Weeber EJ, Levy M, Sampson MJ,et al. The role of mitochondrial porins and the permeability transition pore in learning and synaptic plasticity. J Biol Chem. 2002 May 24;277(21):18891-7.
    Aptowicz CO, Kunkler PE, Kraig RP. Homeostatic plasticity in hippocampal slice cultures involves changes in voltage-gated Na+ channel
    
    
    expression. Brain Res. 2004 ;998(2):155-63.
    Annegers, Coan S P. The risk of epilepsy after traumatic brain injury. Seizure 2000;9:453-457
    Hovda D A, Yoshino A, Kawamata T, et al. Diffuse prolonged depression of cerebral oxidative metabolism following concussive brain injury in the rat:a cytochrome oxidase histochemistry study. Brain Res 1991;567:1-10
    Rall J M, Matzlevich D A, Dash P K. Comparative analysis of mRNA in the frontal cortex and the hippocampus in the basal state and in response to experimental brain injury. Neuropatho Appl Neurobio 2003;29:118-131
    Morceau F, Duvoix A, Delhalle S, et al. Regulation of glutathione S-transferase P1-1 gene expression by NF-kappaB in tumor necrosis factor alpha-treated K562 leukemia cells. Biochem Pharmacol. 2004 Apr 1;67(7):1227-38.
    Nimni ME. Penicillamine and collagen metabolism. Scand J Rheumatol Suppl. 1979;(28):71-8
    付小兵,王德文主编《现代创伤修复学》北京:人民军医出版社,1999,99-101
    Nilsson J, Grahn B, Heby O. Antizyme inhibitor is rapidly induced in growth-stimulated mouse fibroblasts and releases ornithine decarboxylase from antizyme suppression. J. Biochem 2000;346 Pt 3:699-704.
    Siminovitch KA, Neel BG. Regulation of B cell signal transduction by SH2-containing protein-tyrosine phosphatases. Semin Immunol. 1998 Aug;10(4):329-47
    Jiang G, den Hertog J, Su J,et al. Dimerization inhibits the activity of receptor-like protein-tyrosine phosphatase-alpha. Nature. 1999 Oct 7;401(6753):606-10.
    Wu Y, Kimbrough JT, Colbran RJ,et al. Calmodulin kinase is functionally targeted to the action potential plateau for regulation of L-type Ca2+ current in rabbit cardiomyocytes. J Physiol. 2004 Jan 1;554(Pt 1):145-55.
    Sanna P P,Berton F,Cammallleri M,et al. A role for Src kinase in spontaneous epiletiform activity in the CA3 region of the hippocampus. Proc Natl Acad Sci
    
    
    U S A 2000;97(15):8653-8657
    Grant S G N,Odell J J, Karl K,et al. Impaired long-term potentiation,spatial learing and hippocampal development in fyn mutant mice. Science 1992;258:1903-1910
    Mulkey R M, Endo S,Shenolikar S, et al. Involvment of acalcineurin/inhibitor-1 phosphatase cascade in hippocampal long-term depression. Nature 1994;369:486-488
    Zerr I, Bodemer M, Gefeller O,et al. Detection of 14-3-3 protein in the cerebrospinal fluid supports the diagnosis of Creutzfeldt- Jakob Disease. Ann Neurol 1998;43:32-40
    Edwardson JM, Wang CT, Gong B,et al. Expression of mutant huntingtin blocks exocytosis in PC12 cells by depletion of complexin II. J Biol Chem. 2003 ;Aug 15;278(33):30849-53.
    Glynn D, Bortnick RA,Morton AJ. Complexin II is essential for normal neurological function in mice. Hum Mol Genet. 2003 Oct 1;12(19):2431-48.