DNA条形码技术在食品溯源中的应用
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摘要
现在食品安全越来越关注食品的可追溯性。近年来,DNA条形码作为食品溯源中一个潜在有效的工具得到迅速发展。本综述介绍了DNA条形码在食品安全尤其是在食品溯源中的应用,回顾了DNA条形码从概念的提出,到食品检测、食品溯源及防止食品商业欺诈中的应用。DNA条形码能够保障食品安全、防止商业欺诈,但距离真正的大规模应用,还有较长的路要走。
Food traceability is more and more important in the food safety, and as a potentially effective tool in the food traceability, DNA barcode is developing rapidly in recent years. This review describes the applications of DNA barcode in food safety especially in food traceability. From the concept of DNA barcode to food test, food traceability and prevent commercial fraud in food. DNA barcode can ensure food safety and prevent commercial fraud, but to the large-scale applications, there is still a long way to go.
Food traceability is more and more important in the food safety, and as a potentially effective tool in the food traceability, DNA barcode is developing rapidly in recent years. This review describes the applications of DNA barcode in food safety especially in food traceability. From the concept of DNA barcode to food test, food traceability and prevent commercial fraud in food. DNA barcode can ensure food safety and prevent commercial fraud, but to the large-scale applications, there is still a long way to go.
引文
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[29]TELETCHEA F,BERNILLON J,DUFFRAISSE M,et al.Molecular identification of vertebrate species by oligonucleotide microarray in food and forensic samples[J].Journal of Applied Ecology,2008,45:967-975.
[30]PETTERSSON E, BENSCH S, ANDER M, et al. Molecular identification of bloodmeals and species composition in Culicoides biting midges[J].Medical and Veterinary Entomology,2013,27:104-112.
[31]COLOMBO F,CHESSA S,CATTANEO P,et al.Polymerase chain reaction products(PCR)on“DNA barcode zone”resolved by temporal temperature gradient electophoresis:a tool for species identification of mixed meat specimens a:technical note on preliminary results[J].Food Control,2011,22:1471-1472.
[32]YANG Q,ZHAO S,KUCEROVA Z,et al.Validation of the 16S rDNA and COI DNA barcoding technique for rapid molecular identification of stored product psocids[J].Journal of Economic Entomology,2013,106:419-425.
[33]NAKACWA R,KIGGUNDU A,TALWANA H,et al.Nematode 18S rRNA gene is a reliable tool for environmental biosafety assessment of transgenic banana in confined field trials[J]. Transgenic Research, 2013,22:1003-1010.
[34]NEMETH A,WURZ A,ARTIM L,et al.Sensitive PCR analysis of animal tissue samples for fragments of endogenous and transgenic plant DNA[J].Journal of Agricultural and Food Chemistry,2004,52:6129-6135.
[35]ASLAN O,HAMILL R M,SWEENEY T,et al.Integrity of nuclear genomic deoxyribonucleic acid in cooked meat:implications for food traceability[J].Journal of Animal Science,2009,87:57-61.
[36]DUNNING L T, SAVOLAINEN V. Broad-scale amplification of matK for DNA barcoding plants,a technical note[J].Botanical Journal of the Linnean Society,2010,164:1-9.
[37]COSTA J,MAFRA I,CARRAPATOSO I,et al.Almond allergens:molecular characterization,detection,and clinical relevance[J].Journal of Agricultural and Food Chemistry,2012,60:1337-1349.
[38]GALIMBERTI A,de MATTIA F,LOSA A,et al.DNA barcoding as a new tool for food traceability[J].Food Research International,2013,50:55-63.
[39]FISER PECNIKAR Z,BUZAN E V.20 years since the introduction of DNA barcoding:from theory to application[J].Journal of Applied Genetics,2014,55:43-52.
[2]KURZ C,LEITENBERGER M,CARLE R,et al.Evaluation of fruit authenticity and determination of the fruit content of fruit products using FT-NIR spectroscopy of cell wall components[J].Food Chemistry,2010,119:806-812.
[3]FüGEL R,CARLE R,SCHIEBER A.Quality and authenticity control of fruit purées,fruit preparations and jams:a review[J].Trends in Food Science&Technology,2005,16:433-441.
[4]MAFRA I,FERREIRA I M,OLIVEIRA M B P.Food authentication by PCR-based methods[J].European Food Research and Technology,2008,227:649-665.
[5]HELLBERG R S,MORRISSEY M T.Advances in DNA-based techniques for the detection of seafood species substitution on the commercial market[J].Journal of Laboratory Automation,2011,16:308-321.
[6]YOCCOZ N G.The future of environmental DNA in ecology[J].Molecular Ecology,2012,21:2031-2038.
[7]FAJARDO V,GONZáLEZ I,ROJAS M,et al.A review of current PCR-based methodologies for the authentication of meats from game animal species[J].Trends in Food Science&Technology,2010,21:408-421.
[8]ARCURI E F,el SHEIKHA A F,RYCHLIK T,et al.Determination of cheese origin by using 16S rDNA fingerprinting of bacteria communities by PCR-DGGE:preliminary application to traditional Minas cheese[J].Food Control,2013,30:1-6.
[9]HEBERT P D,RATNASINGHAM S,de WAARD J R.Barcoding animal life:cytochrome c oxidase subunit 1 divergences among closely related species.Proceedings of the Royal Society of London[J].Series B:Biological Sciences,2003,270:S96-S99.
[10]CASIRAGHI M,LABRA M,FERRI E,et al.DNA barcoding:a sixquestion tour to improve users’awareness about the method[J].Brief Bioinform,2010,11:440-453.
[11]JOLY S,DAVIES T J,ARCHAMBAULT A,et al.Ecology in the age of DNA barcoding:the resource,the promise and the challenges ahead[J].Molecular Ecology Resources,2014,14:221-232.
[12]SUN X Q,ZHU Y J,GUO J L,et al.DNA barcoding the Dioscorea in China,a vital group in the evolution of monocotyledon:use of matKgene for species discrimination[J].PLoS One,2012,7:e32057.
[13]FAZEKAS A J,BURGESS K S,KESANAKURTI P R,et al.Multiple multilocus DNA barcodes from the plastid genome discriminate plant species equally well[J].PLoS One,2008,3:e2802.
[14]BRUNI I,de MATTIA F,GALIMBERTI A,et al.Identification of poisonous plants by DNA barcoding approach[J].International Journal of Legal Medicine,2010,124:595-603.
[15]RATNASINGHAM S,HEBERT P D.Bold:The barcode of life data system(http://www.barcodinglife.org)[J].Molecular Ecology Notes,2007,7:355-364.
[16]HAJIBABAEI M,MCKENNA C.DNA mini-barcodes[J].Methods in Molecular Biology,2012,858:339-353.
[17]BLACKET M J,SEMERARO L,MALIPATIL M B.Barcoding Queensland fruit flies(Bactrocera tryoni):impediments and improvements[J].Molecular Ecology Resources,2012,12:428-436.
[18]LAIOU A,MANDOLINI L A,PIREDDA R,et al.DNA barcoding as a complementary tool for conservation and valorisation of forest resources[J].Zookeys,2013,365:197-213.
[19]IBANEZ S,MANNEVILLE O,MIQUEL C,et al.Plant functional traits reveal the relative contribution of habitat and food preferences to the diet of grasshoppers[J].Oecologia,2013,173:1459-1470.
[20]GANOPOULOS I,BAZAKOS C,MADESIS P,et al.Barcode DNA high-resolution melting(Bar-HRM)analysis as a novel close-tubed and accurate tool for olive oil forensic use[J].Journal of the Science of Food and Agriculture,2013,93:2281-2286.
[21]BIRD J P,MELIKA G,NICHOLLS J A,et al.Life history,natural enemies,and management of Disholcaspis quercusvirens(Hymenoptera:Cynipidae)on live oak trees[J].Journal of Economic Entomology,2013,106:1747-1756.
[22]de MATTIA F,GENTILI R,BRUNI I,et al.A multi-marker DNA barcoding approach to save time and resources in vegetation surveys[J].Botanical Journal of the Linnean Society,2012,169:518-529.
[23]NOCK C J,WATERS D L,EDWARDS M A,et al.Chloroplast genome sequences from total DNA for plant identification[J]. Plant Biotechnology Journal,2011,9:328-333.
[24]QUILANG J P,YU S C.DNA barcoding of commercially important catfishes in the Philippines[J]. Mitochondrial DNA, 2013.doi:10.3109/19401736.2013.855897.
[25]JO H,GIM J A,JEONG K S,et al.Application of DNA barcoding for identification of freshwater carnivorous fish diets: Is number of prey items dependent on size class for Micropterus salmoides[J].Ecology and Evolution,2014,4:219-229.
[26]BHATTACHARJEE M J, LASKAR B A, DHAR B, et al. Identification and re-evaluation of freshwater catfishes through DNA barcoding[J]. PLoS One,2012,7:e49950.
[27]LERAY M,YANG J Y,MEYER C P,et al.A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity:application for characterizing coral reef fish gut contents[J]. Front Zool, 2013, 10: 34.
[28]HULIN M, WHEALS A. Rapid identification of Zygosaccharomyces with genus-specific primers[J].International Journal of Food Microbiology,2014,173:9-13.
[29]TELETCHEA F,BERNILLON J,DUFFRAISSE M,et al.Molecular identification of vertebrate species by oligonucleotide microarray in food and forensic samples[J].Journal of Applied Ecology,2008,45:967-975.
[30]PETTERSSON E, BENSCH S, ANDER M, et al. Molecular identification of bloodmeals and species composition in Culicoides biting midges[J].Medical and Veterinary Entomology,2013,27:104-112.
[31]COLOMBO F,CHESSA S,CATTANEO P,et al.Polymerase chain reaction products(PCR)on“DNA barcode zone”resolved by temporal temperature gradient electophoresis:a tool for species identification of mixed meat specimens a:technical note on preliminary results[J].Food Control,2011,22:1471-1472.
[32]YANG Q,ZHAO S,KUCEROVA Z,et al.Validation of the 16S rDNA and COI DNA barcoding technique for rapid molecular identification of stored product psocids[J].Journal of Economic Entomology,2013,106:419-425.
[33]NAKACWA R,KIGGUNDU A,TALWANA H,et al.Nematode 18S rRNA gene is a reliable tool for environmental biosafety assessment of transgenic banana in confined field trials[J]. Transgenic Research, 2013,22:1003-1010.
[34]NEMETH A,WURZ A,ARTIM L,et al.Sensitive PCR analysis of animal tissue samples for fragments of endogenous and transgenic plant DNA[J].Journal of Agricultural and Food Chemistry,2004,52:6129-6135.
[35]ASLAN O,HAMILL R M,SWEENEY T,et al.Integrity of nuclear genomic deoxyribonucleic acid in cooked meat:implications for food traceability[J].Journal of Animal Science,2009,87:57-61.
[36]DUNNING L T, SAVOLAINEN V. Broad-scale amplification of matK for DNA barcoding plants,a technical note[J].Botanical Journal of the Linnean Society,2010,164:1-9.
[37]COSTA J,MAFRA I,CARRAPATOSO I,et al.Almond allergens:molecular characterization,detection,and clinical relevance[J].Journal of Agricultural and Food Chemistry,2012,60:1337-1349.
[38]GALIMBERTI A,de MATTIA F,LOSA A,et al.DNA barcoding as a new tool for food traceability[J].Food Research International,2013,50:55-63.
[39]FISER PECNIKAR Z,BUZAN E V.20 years since the introduction of DNA barcoding:from theory to application[J].Journal of Applied Genetics,2014,55:43-52.