摘要
在黑暗条件下,糖能激活拟南芥的茎顶端分生组织(SAM)发育成叶状器官,该现象已成为植物糖敏感性的重要指标之一。本研究发现,通过RNAi降低雷帕霉素靶标(TOR)的表达,能降低拟南芥幼苗的糖敏感性,表明TOR参与了糖对SAM的激活。本研究还通过对265个拟南芥自然生态型的鉴定,筛选到了一个糖敏感性较低的生态型CS76205;进一步分析发现, Col-0和CS76205的F_1代的糖敏感性处于Col-0和CS76205之间,偏向CS76205; Col-0×CS76205 F_2群体的糖敏感性呈正态分布,通过二代测序对CS76205生态型和F_2代的两个极端表型混合池进行全基因组重测序,在3号染色体定位到一个糖激活SAM活性相关的区域,位于2.520 Mb和3.715Mb之间,利用生物信息学的手段对该关联区域进行注释,筛选出9个关键的候选基因。这为进一步克隆该位点基因、揭示该基因功能及其和TOR之间的关系奠定基础。
In the dark, sugar activates the shoot apical meristem(SAM) of Arabidopsis thaliana to develop leaflike organs, which has become one of the important indicators of sugar sensitivity in plant. Our study found that the RNAi of target of rapamycin(TOR) decreased the sugar sensitivity, indicating that TOR is involved in the sugar-responsive SAM activation. We obtained a sugar less sensitive ecotype, CS76205, from 265 Arabidopsis natural ecotypes. Further analysis showed that the degree of sugar sensitivity of F_1 of Col-0 × CS76205 was intermediate between Col-0 and CS76205 and biased towards CS76205. The sugar sensitivity of Col-0 ×CS76205 F_2 population was normal distribution. Whole-genome resequencing and subsequent Bulk Segregant Analysis(BSA)-seq analysis suggested that the sugar-induced SAM activity was mapped on chromosome 3 through a next-generation sequencing of CS76205 and the two extreme phenotype pools of F_2 generation. The associated region, located between 2.520 Mb and 3.715 Mb, was annotated with bioinformatics to filter out nine key candidate genes. Our study will contributes to lay the foundation for further cloning of the locus gene, revealing the function of the gene and its relationship with TOR.
引文
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