Phylogeny and expression pattern of starch branching enzyme family genes in cassava (Manihot esculenta Crantz) under diverse environments

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• 作者：Jinli Pei ; Huijun Wang ; Zhiqiang Xia ; Chen Liu…
• 关键词：Cassava ; Starch branching enzyme ; Differential expression analysis ; Phylogenetic analysis ; Promoter analysis ; Abiotic stress treatment
• 刊名：Molecular and Cellular Biochemistry
• 出版年：2015
• 出版时间：August 2015
• 年：2015
• 卷：406
• 期：1-2
• 页码：273-284
• 全文大小：1,636 KB
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• 作者单位：Jinli Pei (1) (3)
  Huijun Wang (2)
  Zhiqiang Xia (3)
  Chen Liu (3)
  Xin Chen (3)
  Pingan Ma (3)
  Cheng Lu (3)
  Wenquan Wang (3)
  
  1. College of Agriculture, Hainan University, Renmin Road No. 58, Haikou, 570228, People鈥檚 Republic of China
  3. The Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences, Key Laboratory of Biology and Genetic Resources of Tropical Crops, Ministry of Agriculture, Haikou, 571101, People鈥檚 Republic of China
  2. Qiongzhou University, Sanyan, 572022, People鈥檚 Republic of China
  
• 刊物类别：Biomedical and Life Sciences
• 刊物主题：Life Sciences
  Biochemistry
  Medical Biochemistry
  Oncology
  Cardiology
  
• 出版者：Springer Netherlands
• ISSN：1573-4919

文摘

Starch branching enzyme (SBE) is one of the key enzymes involved in starch biosynthetic metabolism. In this study, six SBE family genes were identified from the cassava genome. Phylogenetic analysis divided the MeSBE family genes into dicot family A, B, C, and the new group. Tissue-specific analysis showed that MeSBE2.2 was strongly expressed in leaves, stems cortex, and root stele, and MeSBE3 had high expression levels in stem cortex and root stele of plants in the rapid growth stage under field condition, whereas the expression levels of MeSBE2.1, MeSBE4, and MeSBE5 were low except for in stems cortex. The transcriptional activity of MeSBE2.2 and MeSBE3 was higher compared with other members and gradually increased in the storage roots during root growth process, while the other MeSBE members normally remained low expression levels. Expression of MeSBE2.2 could be induced by salt, drought, exogenous abscisic acid, jasmonic acid, and salicylic acid signals, while MeSBE3 had positive response to drought, salt, exogenous abscisic acid, and salicylic acid in leaves but not in storage root, indicating that they might be more important in starch biosynthesis pathway under diverse environments.