Mobile ISCR elements: Structure, functions, and role in emergence, increase, and spread of blocks of bacterial multiple antibiotic resistance genes
详细信息 查看全文
- 作者：T. S. Ilyina (1)
- 关键词：distribution of antibiotic resistance genes ; ISCR ; atypical IS elements ; horizontal distribution of genes ; evolution of bacteria
- 刊名：Molecular Genetics, Microbiology and Virology
- 出版年：2012
- 出版时间：October 2012
- 年：2012
- 卷：27
- 期：4
- 页码：135-146
- 全文大小：263KB
- 参考文献：1. Ilyina, T.S. and Romanova, Yu.M., / Mol. Biol., 2002, vol. 36, no. 2, pp. 228鈥?39. CrossRef
2. Ilyina, T.S., / Mol. Genet., 2003, vol. 4, pp. 3鈥?0.
3. Ilyina, T.S., / Russ. J. Genet., 2006, vol. 42, pp. 1536鈥?546. CrossRef
4. Mindlin, S.Z., Soina, V.S., Petrova, M.A., and Gorlenko, Zh.M., / Russ. J. Genet., 2008, vol. 44, pp. 36鈥?4. CrossRef
5. Petrova, M.A., Gorlenko, Zh.M., Soina, V.S., and Mindlin, S.Z., / Russ. J. Genet., 2008, vol. 44, pp. 1281鈥?286. CrossRef
6. Petrova, M.A., Gorlenko, Zh.M., Shcherbatova, N.A., and Mindlin, S.Z., / Russ. J. Genet., 2012, vol. 48, pp. 324鈥?32. CrossRef
7. Aoki, T., Egusa, S., Ogata, Y., and Watanabe, T., / J. Gen. Microbiol., 1971, vol. 65, pp. 343鈥?49. CrossRef
8. Arduino, S.M., Roy, P.H., Jacoby, G.A., et al., / Antimicrob. Agents Chemother., 2002, vol. 46, pp. 2303鈥?306. CrossRef
9. Arduino, S.M., Catabano, M., Orman, B.E., et al., / Antimicrob. Agents Chemother., 2003, vol. 47, pp. 3945鈥?949. CrossRef
10. Bartosic, D., Pitirski, M., Dziewit, L., et al., / J. Bacteriol., 2008, vol. 190, pp. 3306鈥?313. CrossRef
11. Beaber, J.W., Hochnut, B., and Waldor, M.K., / J. Bacteriol., 2002, vol. 184, pp. 4259鈥?269. CrossRef
12. Bennett, P.M., / J. Pharmacol., 2008, vol. 153, pp. s347鈥搒357.
13. Bennett, P.M., / Meth. Mol. Biol., 2004, vol. 266, pp. 71鈥?13.
14. Blickwede, M. and Schwarz, S., / J. Antimicrob. Chemother., 2004, vol. 53, pp. 58鈥?4. CrossRef
15. Boerlin, P. and Reid-Smith, R.S., / Anim. Health Res. Rev., 2008, vol. 9, pp. 115鈥?26. CrossRef
16. Boyd, D., Peters, G.A., Cloeckaert, A., et al., / J. Bacteriol., 2001, vol. 183, pp. 5725鈥?732. CrossRef
17. Boyd, D., Clockaert, A., Chaslus-Dancle, E., and Mulvay, M.R., / Antimoicrob. Agents Chemother., 2002, vol. 46, no. 6, pp. 1714鈥?722. CrossRef
18. Burland, V., Shao, Y., Perna, N.F., et al., / Nucleic Acids Res., 1998, vol. 26, pp. 4196鈥?294. CrossRef
19. Burrus, V. and Walder, M.K., / Res. Microbiol., 2004, vol. 155, pp. 376鈥?86. CrossRef
20. Burrus, V., Pavlovic, G., Decaris, B., and Guedon, G., / Mol. Microbiol., 2002, vol. 46, pp. 601鈥?10. CrossRef
21. Call, D.R., Singer, R.S., Da Meng, et al., / Antimicrob. Agents Chemother., 2010, vol. 54, pp. 590鈥?96. CrossRef
22. Cloeckaert, A., Baucheron, S., and Chaslus-Danela, E., / Antimicrob. Agents Chemother., 2001, vol. 45, pp. 2381鈥?382. CrossRef
23. Collis, C.M. and Hall, R.M., / Mol. Microbiol., 1992, vol. 6, pp. 2875鈥?885. CrossRef
24. Collis, C.M., Grammaticopolos, G., Briten, J., et al., / Mol. Microbiol., 1993, vol. 9, pp. 41鈥?2. CrossRef
25. Davies, J.E., in / Antibiotic Resistance: Origins, Evolution, Selection and Spread, Chadwick, D.J., Goode, J., Eds., New York: J. Wiley and Sons, 1997, pp. 15鈥?7.
26. D鈥機osta, V.M., Griffiths, E., and Wright, G.D., / Curr. Opin. Microbiol., 2007, vol. 10, pp. 481鈥?99. CrossRef
27. Debroy, C., Sidhu, M.S., Sarker, U., et al., / Plasmid, 2010, vol. 63, pp. 53鈥?0. CrossRef
28. Doi, Y., Shibata, N., Shibayama, K., et al., / Antimicrob. Agents Chemother., 2002, vol. 46, pp. 2427鈥?434. CrossRef
29. Doublet, B., Butaye, P., Imberechts, H., et al., / Antimicrob. Agents Chemother., 2004, vol. 48, pp. 2510鈥?517. CrossRef
30. Doublet, B., Boyd, D.A., Mulvey, M.R., and Cloeckaert, A., / Mol. Microbiol., 2005, vol. 55, pp. 1911鈥?924. CrossRef
31. Doublet, B., Poirel, L., Praud, K., et al., / J. Antimicrob. Chemother., 2010, vol. 65, pp. 2260鈥?262. CrossRef
32. Doublet, B., Schwarz, S., Kehreberg, C., and Cloeckaert, A., / Antimicrob. Agents Chemother., 2005, vol. 49, p. 2106.
33. Fernandez-Alarcon, C., Singer, R.S., and Johnson, T.J., / PLoS ONE, 2011, vol. 6, no. 8, p. e23415. CrossRef
34. Fluit, A. and Schmitz, F.J., / Eur. J. Microbiol. Innfect. Dis., 1999, vol. 18, pp. 761鈥?70. CrossRef
35. Fournier, P.E., Vellenet, D., Barbe, V., et al., / PLoS Genet., 2006, vol. 2, p. e7. CrossRef
36. Fricke, W.F., McDermott, P.F., Mammel, M.K., et al., / Appl. Environ. Microbiol., 2009, vol. 75, pp. 5963鈥?971. CrossRef
37. Fricke, W.F., Welsh, T.J., McDermott, P.F., et al., / J. Bacteriol., 2009, vol. 191, pp. 4750鈥?757. CrossRef
38. Frost, L.S., Leplac, R., Summers, A.O., and Toussaint, A., / Nat. Rev. Microbiol., 2005, vol. 3, pp. 722鈥?32. CrossRef
39. Galimand, M., Sabtcheva, S., Courvalin, P., and Lambert, T., / Antimicrob. Agents Chemother., 2005, vol. 49, pp. 2949鈥?953. CrossRef
40. Galimand, M., Courvalin, P., and Lambert, T., / Antimicrob. Agents Chemother., 2003, vol. 47, pp. 2565鈥?571. CrossRef
41. Garcillian-Barcia, M.P., Bernales, I., Mendiola, M.V., and de la Cruz, F., in / Mobile DNA II, Craig, N.L., et al., Eds., Washington: ASM Press, 2002, pp. 891鈥?04.
42. Carcillian-Barcia, M.P. and de la Cruz, F., / FEMS Microbiol. Ecol., 2002, vol. 42, pp. 303鈥?13. CrossRef
43. Garcillian-Barcia, M.P., Bernales, M., Mendiola, M.V., and de la Cruz, F., / Mol. Microbiol., 2002, vol. 39, pp. 494鈥?01. CrossRef
44. Gonzalez-Zorn, B., Catalan, A., Escudero, J.A., et al., / J. Antimicrob. Chemother., 2005, vol. 56, pp. 583鈥?85. CrossRef
45. Gonzalez-Zorn, B., Teshager, T., Casas, M., et al., / Emerg. Infect. Dis., 2005, vol. 11, pp. 954鈥?56. CrossRef
46. Gootz, T.D., / Crit. Rev. Immunol., 2010, vol. 30, pp. 79鈥?3. CrossRef
47. Hansson, K., Sandstrom, L., Pelletier, A., and Roy, P.H., / J. Bacteriol., 2002, vol. 184, pp. 1712鈥?721. CrossRef
48. Hochnat, B., Lotfi, Y., Mazel, D., et al., / Antimicrob. Agents Chemother., 2001, vol. 45, pp. 2991鈥?000. CrossRef
49. Kim, M.J., Hirono, I., Kurokawa, K., et al., / Antimicrob. Agents Chemother., 2008, vol. 52, pp. 606鈥?11. CrossRef
50. Lindsey, R.L., Fedorka-Cray, P.J., Frye, J.G., and Meinersmann, R.J., / Appl. Environ. Microbiol., 2009, vol. 75, pp. 1908鈥?915. CrossRef
51. Martinez, J.L., / Science, 2008, vol. 321, pp. 365鈥?67. CrossRef
52. Mcintosh, D., Canningham, M., Ji, B., et al., / Antimicrob. Agents Chemother., 2008, vol. 52, pp. 1221鈥?228. CrossRef
53. Melano, R., Corso, A., Peroni, A., et al., / J. Antimicrob. Agents Chemother, 2008, vol. 52, pp. 36鈥?2. CrossRef
54. Mendiola, M.V. and de la Cruz, F., / Mol. Microbiol., 1989, vol. 3, pp. 979鈥?84. CrossRef
55. Mendiola, M.V., Bernalis, I., and de la Cruz, F., / Proc. Natl. Acad. Sci. USA, 1994, vol. 91, pp. 1922鈥?926. CrossRef
56. Mindlin, S., Petrova, M., Gorlenko, Zh., et al., / New Permafrost and Glacier Research, Hauppauge: Nova Science Publ., 2009, pp. 89鈥?05.
57. Mulvey, M.R., Boyd, D.A., Olson, A.B., et al., / Microb. Infect., 2006, vol. 8, pp. 1915鈥?922. CrossRef
58. Pan, J.C., Ye, R., Wang, H.Q., et al., / Antimicrob. Agents Chemother., 2008, vol. 52, pp. 3859鈥?836. CrossRef
59. Patridge, S.R., Recchia, G.D., Scaramuzzi, C., et al., / Microbiology, 2000, vol. 146, pp. 2855鈥?864.
60. Patridge, S.R. and Hall, R.M., / Antimicrob. Agents Chemother., 2003, vol. 47, pp. 342鈥?49. CrossRef
61. Papanicolaou, G.A., Medeiros, A.A., and Jacoby, G.A., / Antimicrob. Agents Chemother., 1990, vol. 34, pp. 2200鈥?209. CrossRef
62. Poirel, L., Lartigue, M.E., Decousser, J.W., and Nordmann, P., / Antimicrob. Agents Chemother., 2005, vol. 49, pp. 447鈥?50. CrossRef
63. Poirel, L., Mugnier, P.D., Toleman, M.A., et al., / Antimicrob. Agents Chemother., 2009, vol. 53, pp. 4940鈥?943. CrossRef
64. Power, P., Gallant, M., Di Conza, J., et al., / J. Antimicrob. Chemother., 2005, vol. 55, pp. 461鈥?65. CrossRef
65. Revilla, C., Garcillian-Barcia, M.P., Fernandes-Lopes, R., et al., / Antimicrob. Agents Chemother., 2008, vol. 52, pp. 1472鈥?480. CrossRef
66. Riesenfield, S.C., Goodman, R.M., and Handelsman, J., / Environ. Microbiol., 2004, vol. 6, pp. 981鈥?89. CrossRef
67. Rodriguez-Martinez, J.-M., Poirel, L., Canton, R., and Nordmann, P., / Antimicrob. Agents Chemother., 2006, vol. 50, pp. 2544鈥?546. CrossRef
68. Rodriguez-Martienz, J.-M., Poirel, L., and Nordmann, P., / Antimicrob. Agents Chemother., 2009, vol. 53, pp. 4783鈥?788. CrossRef
69. Rodstrom, P. and Swedberg, G., / Antimicrob. Agents Chemother., 1988, vol. 32, pp. 1684鈥?692. CrossRef
70. Rowe-Magnus, D.A. and Mazel, D., / Curr. Opin. Microbiol., 1999, vol. 2, pp. 3015鈥?027. CrossRef
71. Rowe-Magnus, D.A. and Mazel, D., / Curr. Opin. Microbiol., 2001, vol. 4, pp. 565鈥?69. CrossRef
72. Rowe-Magnus, D.A. and Mazel, D., / J. Med. Microbiol., 2002, vol. 292, pp. 115鈥?25. CrossRef
73. Sabato, M., Navarro, F., Miro, E., et al., / Antimicrob. Agents Chemother., 2002, vol. 46, pp. 2656鈥?661. CrossRef
74. Sabtcheva, S., Galimand, M., Gerbaud, G., et al., / Antimicrob. Agents Chemother., 2003, vol. 47, pp. 1584鈥?588. CrossRef
75. Schleinitz, K.M., Vallaeys, T., and Kleinsteuber, S., / Antimicrob. Agents Chemother., 2010, vol. 54, pp. 4321鈥?328. CrossRef
76. Schleinitz, K.M., Kleinsteuber, S., Vallayes, T., and Babel, W., / Appl. Environ. Microbiol., 2004, vol. 70, pp. 5357鈥?365. CrossRef
77. Schmidt, H. and Hensel, M., / Clin. Microbiol. Rev., 2004, vol. 17, pp. 14鈥?6. CrossRef
78. Scholz, P., Haring, V., Wittmannliebold, C., et al., / Gene, 1989, vol. 75, pp. 271鈥?88. CrossRef
79. Shintani, M., Takahashi, Y., Tokumaru, H., et al., / Environ. Microbiol., 2010, vol. 12, pp. 1413鈥?426.
80. Stokes, H.W. and Hall, R.M., / Mol. Microbiol., 1983, vol. 3, pp. 1669鈥?683. CrossRef
81. Tavakoli, N., Comanducci, A., Dodd, H.M., et al., / Plasmid, 2000, vol. 44, pp. 66鈥?4. CrossRef
82. Toleman, M.A., Bennett, P.M., and Walsh, T.R., / Microbiol. Mol. Biol. Rev., 2006, vol. 70, pp. 296鈥?16. CrossRef
83. Toleman, M.A., Bennett, P.M., and Walsh, T.R., / J. Antimicrob. Chemother., 2006, vol. 58, pp. 1鈥?. CrossRef
84. Toleman, M.A. and Walsh, T.R., / Antimicrob. Agents Chemother., 2008, vol. 52, pp. 3789鈥?791. CrossRef
85. Toleman, M.A. and Walsh, T.R., / FEMS Microbiol. Rev., 2011, vol. 35, pp. 912鈥?35. CrossRef
86. Toleman, M.A. and Walsh, T.R., / Antimicrob. Agents Chemother., 2010, vol. 54, p. 3534. CrossRef
87. Verdel, C., Arlet, G., Bernaud, G., et al., / Antimicrob. Agents Chemother., 2000, vol. 44, pp. 222鈥?25. CrossRef
88. Wachino, J., Yamana, K., Kimura, K., et al., / Antimicrob. Agents Chemother., 2006, vol. 50, pp. 3212鈥?215. CrossRef
89. Walsh, T.R. and Toleman, M.A., / Antimicrob. Agents Chemother., 2009, vol. 53, pp. 1248鈥?251. CrossRef
90. Wang, M.G., Tran, J.H., Jacoby, G.A., et al., / Antimicrob. Agents Chemother., 2003, vol. 47, pp. 2242鈥?248. CrossRef
91. Welsh, T.J., Fricke, W.F., McDermott, P., et al., / PLoS ONE, 2007, vol. 2, p. e309. CrossRef
92. Yan, J., Wu, J., Ko, S., et al., / J. Antimicrob. Chemother., 2004, vol. 54, pp. 1007鈥?012. CrossRef
93. Zabala, J.C., Garcia-Lobo, J.M., Diaz-Aroca, E., et al., / Mol. Gen. Genet., 1984, vol. 197, pp. 90鈥?7. CrossRef
94. Zong, Z., Partidge, S.R., and Iredell, J.R., / Antimicrob. Agents Chemother., 2010, vol. 54, pp. 3039鈥?042. CrossRef - 作者单位：T. S. Ilyina (1)
1. Gamaleya Research Institute of Epidemiology and Microbiology, Ministry of Health and Social Development of the Russian Federation, Moscow, Russia - ISSN：1934-841X
文摘
The recently discovered method of horizontal distribution of bacterial genes with ISCR atypical insertion sequences is reviewed using the example of drug-resistance genes. The mechanism of transposition of such elements including rolling circle replication, formation of autonomous nonreplicable circular structures, and homologous recombination provides mobilization of any section of the adjacent DNA. ISCR elements represent a more powerful gene mobilization system than transposons and integrons and provide formation of groups of mobile genes, including antibiotic resistance genes of pathogenic bacteria. The structure and functions of ISCR elements are discussed together with their similarity and dissimilarity to IS91-like elements and their role in emergence of blocks of multiple antibiotic resistance genes and their contribution to evolution of bacteria and plasmids.