From candidate gene to genome-wide association studies in cardiovascular disease

详细信息	查看全文 | 推荐本文 |

• 作者：Francesco Gianfagna ; Daniela Cugino ; Iolanda Santimone ; Licia Iacoviello ; ^{licia.iacoviello@rm.unicatt.it}
• 关键词：CAD ; coronary artery disease ; FDR ; false discovery rate ; GWAS ; genome-wide association studies ; MI ; myocardial infarction ; NCBI ; National Center for Biotechnology Information ; SNP ; single nucleotide polymorphism
• 刊名：Thrombosis Research
• 出版年：2012
• 期刊代码：247_00493848
• 类别：med
• 出版时间：March, 2012
• 卷：129
• 期：3
• 页码：320-324
• 文件大小：161 K

摘要

Continuous updating of the genotyping technology has led to improvement of genetic study design. The recent advances in technology coupled with the advances in our understanding of the molecular mechanisms have allowed a more comprehensive examination of the role of genetics, environment and their interaction in determining the individual risk of cardiovascular disease (CVD).

Initial candidate gene studies identified a limited number of polymorphisms associated with disease, explaining only a minor part of trait variance. Furthermore, results were not often concordant, with meta-analyses not reaching the statistical power to confirm an association in many cases. The advent of the genome-wide design furnished an enormous quantity of information and decreased time of genotyping, while increased complexity of analyses and costs. Their results were more concordant, even when they suggested associations between CVD and polymorphisms distant from codifying regions or in genes involved in previously unsuspected pathways. Future results from genome-wide studies coupled with results from functional studies and investigation on gene-environment interactions will allow improvement of cardiovascular risk assessment and discovery of new targets for therapy and prevention.

In this review, a brief history of cardiovascular genetics is reported, from candidate gene to genome wide association studies, that led to the identification of association between CVD and SNPs in the 9p21 region, firstly thought a gene desert without importance.