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文化遗产微生物研究方法进展
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  • 英文篇名:Advances in Microbial Research Methods on Cultural Heritage
  • 作者:武发思 ; 苏敏 ; 田恬 ; 汪万福 ; 冯虎
  • 英文作者:WU Fa-si;SU Min;TIAN Tian;WANG Wan-fu;FENG Hu-yuan;MOE Key Lab.of Cell Act.& Stress Adapt.,Lanzhou Uni.;Natl.Res.Cent.Conserv.of Anc.Wall Paint.& Earth.Sites,Dunhuang Acad.;Key Sci.Res.Base of Conserv.Anc.Mur.,SACH;Key Lab.Conserv.of Anc.Wall Paint.& Earth.Sites,Gansu Prov.;
  • 关键词:文物 ; 生物退化 ; 方法与技术 ; 防治措施 ; 保护
  • 英文关键词:cultural relics;;biodeterioration;;methods and techniques;;controlling measures;;conservation
  • 中文刊名:WSWX
  • 英文刊名:Journal of Microbiology
  • 机构:兰州大学细胞活动与逆境适应教育部重点实验室;敦煌研究院国家古代壁画与土遗址保护工程技术研究中心;古代壁画保护国家文物局重点科研基地;甘肃省古代壁画与土遗址保护重点实验室;
  • 出版日期:2019-06-15
  • 出版单位:微生物学杂志
  • 年:2019
  • 期:v.39
  • 基金:国家自然科学基金项目(31500430,31560160);; 中国科学院“西部之光”人才培养引进计划;; 甘肃省科技计划项目(18JR3RA004;1604WKCA003);; 甘肃省文物局课题(GWJ2014003)
  • 语种:中文;
  • 页:WSWX201903012
  • 页数:13
  • CN:03
  • ISSN:21-1186/Q
  • 分类号:77-89
摘要
文化遗产的生物退化与生物降解问题普遍存在。从方法学的角度回顾了针对不同类型文化遗产微生物病害与防治研究中常用的方法和技术,总结了国内外当前所取得的主要研究进展,提出了该领域研究中未来面临的问题和挑战,并展望了应对策略和今后发展趋势。文化遗产微生物研究方法经历了传统培养、显微镜分析、分子生物学技术、酶活性和代谢产物分析以及快速发展的多组学及生物信息学分析等多个阶段,在微生物多样性、群落特征、生理生态学及其退化机理方面的认识已逐渐深入,以文化遗产保护为目标的病害微生物防治技术不断发展。近年来通过新一代测序和宏基因组学技术获得了文化遗产微生物的诸多重要信息,但其作用机理和影响因素的研究还不够。本综述突出了结合传统与现代方法技术开展研究的重要性,旨在为文化遗产微生物学领域研究提供参考和借鉴。
        Biodeterioration and biodegradation are ubiquitous problems at cultural heritage sites worldwide. This paper reviewed from perspective of methodology for the methods and techniques commonly used in the study of microbial biodeterioration of typical cultural heritage, and mainly summarized advances in current researches both home and abroad, and put forward the problems and challenges for the future study in this field, and looked forwards to coping with the strategies and developing trends in the future. The methods of microbial research on cultural heritage have experienced many stages of traditional pure cultivation, microscopic analysis, molecular biology techniques, enzyme activity and metabolite analysis, as well as rapid developing multi-omics and bioinformatics analysis, and gradually deepen understand on microbial diversity, community features, eco-physiology and the aspect of deterioration mechanisms; aiming at constant developing prevention techniques of cultural heritages to control diseases caused by microorganisms. Recently plenty of important information on cultural heritage microorganisms was obtained through new generation techniques of sequencing and macrogenomics, however, the research on the effective mechanism and influencing factors still are not enough. This review highlights the importance of combining traditional and modern methods, and techniques for carrying out the research, aiming at providing references and drawing on the experiences for microbiologic studies on cultural heritage.
引文
[1]Gadd GM.Geomicrobiology of the built environment[J].Nature Microbiology,2017,2(4):16275.
    [2]Dakal TC,Arora PK.Evaluation of potential of molecular and physical techniques in studying biodeterioration[J].Reviews in Environmental Science and Bio/Technology,2012,11(1):71-104.
    [3]Beguinot A.La Fora delle mura e delle vie di Padova[Z].Studio Biogeographico.Malpighia,1912,24:413-428.
    [4]Koestler RJ.Biodeterioration of cultural heritage[J].International Biodeteriorioration,1991,28:1-341.
    [5]Cappitelli F,Abbruscato P,Foladori P,et al.Detection and elimination of Cyanobacteria from frescoes:case of the St.Brizio Chapel(Orvieto Cathedral,Italy)[J].Microbial Ecology,2009,57(4):633-639.
    [6]Pepe O,Sannino L,Palomba S,et al.Heterotrophic microorganisms in deteriorated medieval wall paintings in southern Italian churches[J].Microbiological Research,2010,165(1):21-32.
    [7]Ikner LA,Toomey RS,Nolan G,et al.Culturable microbial diversity and the impact of tourism in Kartchner Caverns,Arizona[J].Microbial Ecology,2007,53(1):30-42.
    [8]Unkovi c'N,Eri c'S,ˇsari c'K,et al.Biogenesis of secondary mycogenic minerals related to wall paintings deterioration process[J].Micron,2017,100:1-9.
    [9]Wang W,Ma Y,Ma X,et al.Diversity and seasonal dynamics of airborne bacteria in the Mogao Grottoes,Dunhuang,China[J].Aerobiologia,2012,28(1):27-38.
    [10]Wang W,Ma Y,Ma X,et al.Seasonal variations of airborne bacteria in the Mogao Grottoes,Dunhuang,China[J].International Biodeterioration&Biodegradation,2010,64(4):309-315.
    [11]Wang W,Ma X,Ma Y,et al.Seasonal dynamics of airborne fungi in different caves of the Mogao Grottoes,Dunhuang,China[J].International Biodeterioration&Biodegradation,2010,64(6):461-466.
    [12]Wang W,Ma X,Ma Y,et al.Molecular characterization of airborne fungi in caves of the Mogao Grottoes,Dunhuang,China[J].International Biodeterioration&Biodegradation,2011,65(5):726-731.
    [13]俄军,武发思,汪万福,等.魏晋五号壁画墓保存环境中空气微生物监测研究[J].敦煌研究,2013,(6):109-116.
    [14]Epstein S.The phenomenon of microbial uncultivability[J].Current Opinion in Microbiology,2013,16(5):636-642.
    [15]Jroundi F,Schiro M,Ruiz-Agudo E,et al.Protection and consolidation of stone heritage by self-inoculation with indigenous carbonatogenic bacterial communities[J].Nature Communications,2017,8:279.
    [16]Santos A,Cerrada A,García S,et al.Application of molecular techniques to the elucidation of the microbial community structure of antique paintings[J].Microbial Ecology,2009,58(4):692-702.
    [17]Cámara B,De IRA,Urizal M,et al.Characterizing the microbial colonization of a dolostone quarry:implications for stone biodeterioration and response to biocide treatments[J].Microbial Ecology,2011,62(2):299-313.
    [18]Ríos ADL,Cámara B,Garcíad CM,et al.Deteriorating effects of lichen and microbial colonization of carbonate building rocks in the Romanesque churches of Segovia(Spain)[J].Science of the Total Environment,2009,407(3):1123-1134.
    [19]Coutinho ML,Miller AZ,Gutierrez-Patricio S,et al.Microbial communities on deteriorated artistic tiles from Pena National Palace(Sintra,Portugal)[J].International Biodeterioration&Biodegradation,2013,84(5):322-332.
    [20]Cennamo P,Caputo P,Giorgio A,et al.Biofilms on tuff stones at historical sites:edentification and removal by nonthermal effects of radiofrequencies[J].Microbial Ecology,2013,66(3):659-668.
    [21]武发思,汪万福,马燕天,等.敦煌莫高窟第98窟壁画表面菌斑的群落结构分析[J].微生物学通报,2013,40(9):1599-1608.
    [22]Duan Y,Wu F,Wang W,et al.The microbial community characteristics of ancient painted sculptures in Maijishan Grottoes,China[J].Plos One,2017,12(7):0179718.
    [23]Duan Y,Wu F,Wang W,et al.Differences of microbial community on the wall paintings preserved in situ,and ex situ,of the Tiantishan Grottoes,China[J].International Biodeterioration&Biodegradation,2018,132:102-113.
    [24]Konkol N,Mcnamara CJ,Mitchell R.Fluorometric detection and estimation of fungal biomass on cultural heritage materials[J].Microbiol Methods,2010,80(2):178-182.
    [25]Konkol NR,Mcnamara CJ,Hellman E,et al.Early detection of fungal biomass on library materials[J].Journal of Cultural Heritage,2012,13(2):115-119.
    [26]Konkol NR,Vasanthakumar A,Dearaujo A,et al.A non-fluidic,fluorometric assay for the detection of fungi on cultural heritage materials[J].Annals of Microbiology,2013,63(3):965-970.
    [27]Sanmartín P,Chorro E,Vázquez-Nion D,et al.Conversion of a digital camera into a non-contact colorimeter for use in stone cultural heritage:The application case to Spanish granites[J].Measurement,2014,56(10):194-202.
    [28]Chai B,Su B,Zhang W,et al.Standard multispectral image database for paint materials used in the Dunhuang Murals[J].Spectroscopy and Spectral Analysis,2017,37:3289-3306.
    [29]Dyda M,Decewicz P,Romaniuk K,et al.Application of metagenomic methods for selection of an optimal growth medium for bacterial diversity analysis of microbiocenoses onhistorical stone surfaces[J].International Biodeterioration&Biodegradation,2018,131:2-10.
    [30]Sanmartín P,Dearaujo A,Vasanthakumar A.Melding the old with the new:trends in methods used to identify,monitor,and control microorganisms on cultural heritage materials[J].Microbial Ecology,2016:1-17.
    [31]Rosado T,Mir珓ao J,Candeias A,et al.Microbial communities analysis assessed by pyrosequencing-a new approach applied to conservation state studies of mural paintings[J].Analytical&Bioanalytical Chemistry,2014,406(3):887-895.
    [32]Lupan I,Ianc MB,Kelemen BS,et al.New and old microbial communities colonizing a seventeenth-century wooden church[J].Folia Microbiologica,2014,59(1):45-51.
    [33]Ortiz R,Párraga M,Navarrete J,et al.Investigations of biodeterioration by fungi in historic wooden churches of Chilo,Chile[J].Microbial Ecology,2014,67(3):568-575.
    [34]Kusumi A,Li X,Yu O,et al.Bacterial communities in pigmented biofilms formed on the sandstone bas-relief walls of the Bayon Temple,Angkor Thom,Cambodia[J].Microbes&Environments,2013,28(4):422-431.
    [35]Hu H,Ding S,Katayama Y,et al.Occurrence of Aspergillus allahabadii,on sandstone at Bayon temple,Angkor Thom,Cambodia[J].International Biodeterioration&Biodegradation,2013,76(1):112-117.
    [36]颜菲,葛琴雅,李强,等.云冈石窟石质文物表面及周边岩石样品中微生物群落分析[J].微生物学报,2012,52(5):629-636.
    [37]吴明辉,章高森,陈拓,等.石生微生物研究进展[J].微生物学杂志,2017,37(4):64-73.
    [38]Ma Y,Zhang H,Du Y,et al.The community distribution of bacteria and fungi on ancient wall paintings of the Mogao Grottoes[J].Scientific Reports,2015,5:7752.
    [39]Meng H,Luo L,Chan HW,et al.Higher diversity and abundance of ammonia-oxidizing archaea than bacteria detected at the Bayon Temple of Angkor Thom in Cambodia[J].International Biodeterioration&Biodegradation,2016,115:234-243.
    [40]KrakováL,ChovanováK,PuˇskarováA,et al.A novel PCR-based approach for the detection and classification of potential cellulolytic fungal strains isolated from museum items and surrounding indoor environment[J].Letters in Applied Microbiology,2012,54(5):433-440.
    [41]Krakova L,De LF,Bruno L,et al.Complex bacterial diversity in the white biofilms of the Catacombs of St.Callixtus in Rome evidenced by different investigation strategies[J].Environmental Microbiology,2015,17(5):1738-1752.
    [42]Hugenholtz P,Tyson GW,Blackall L.Design and evaluation of 16S r RNA-targeted oligonucleotide probes for fluorescence in situ hybridization[M].//de Muro M A,Rapley R.Gene Probes.Methods in Molecular Biology,Humana Press,Totowa,NJ,2002,179(4):29.
    [43]González-Pérez M,Brinco C,Vieira R,et al.Dual phylogenetic staining protocol for simultaneous analysis of yeast and bacteria in artworks[J].Applied Physics A,2017,123(2):142.
    [44]Kostanjˇsek R,Paˇsi c'L,Daims H,et al.Structure and community composition of sprout-like bacterial aggregates in a Dinaric Karst subterranean stream[J].Microbial Ecology,2013,66(1):5-18.
    [45]Vasanthakumar A,Dearaujo A,Mazurek J,et al.Microbiological survey for analysis of the brown spots on the walls of the tomb of King Tutankhamun[J].International Biodeterioration&Biodegradation,2013,79(4):56-63.
    [46]Xu J,Wei Y,Jia H,et al.A new perspective on studying burial environment before archaeological excavation:analyzing bacterial community distribution by high-throughput sequencing[J].Scientific Report,2017,7:41691.
    [47]Li Q,Zhang B,Yang X,et al.Deterioration-Associated microbiome of stone monuments:structure,variation,and assembly[J].Environmental Microbiology,2018,84(7):02680-17.
    [48]Zimmermann J,Gonzalez JM,Saiz-Jimenez C.Epilithic biofilms in Saint Callixtus Catacombs(Rome)harbour a broad spectrum of Acidobacteria[J].Antonie Van Leeuwenhoek,2006,89(1):203-208.
    [49]Cuzman OA,Ventura S,Sili C,et al.Biodiversity of phototrophic biofilms dwelling on monumental fountains[J].Microbial Ecology,2010,60(1):81-95.
    [50]Adamiak J,Otlewska A,Tafer H,et al.First evaluation of the microbiome of built cultural heritage by using the Ion Torrent next generation sequencing platform[J].International Biodeterioration&Biodegradation,2018,131:11-18.
    [51]Rakotonirainy MS,Dubar P.Application of bioluminescence ATP measurement for evaluation of fungal viability of foxing spots on old documents[J].Luminescence,2013,28(3):308-312.
    [52]Troiano F,Polo A,Villa F,et al.Assessing the microbiological risk to stored sixteenth century parchment manuscripts:a holistic approach based on molecular and environmental studies[J].Biofouling,2014,30(3):299-311.
    [53]葛琴雅,潘晓轩,李强,等.ATP生物发光法在文物抑菌剂效力检测中的应用[J].文物保护与考古科学,2014,26(4):39-46.
    [54]Bergadi FE,Laachari F,Elabed S,et al.Cellulolytic potential and filter paper activity of fungi isolated from ancients manuscripts from the Medina of Fez[J].Annals of Microbiology,2014,64(2):815-822.
    [55]Villa F,Vasanthakumar A,Mitchell R,et al.RNA-based molecular survey of biodiversity of limestone tombstone microbiota in response to atmospheric sulfur pollution[J].Letters in Applied Microbiology,2015,60(1):92-102.
    [56]Rd PL,Pierson EA.Metabolism and function of phenazines in bacteria:impacts on the behavior of bacteria in the environment and biotechnological processes[J].Applied Microbiology&Biotechnology,2010,86(6):1659-1670.
    [57]Kirby DP,Buckley M,Promise E,et al.Identification of collagen-based materials in cultural heritage[J].Analyst,2013,138(17):4849-4858.
    [58]Corsaro C,Mallamace D,Lojewska J,et al.Molecular degradation of ancient documents revealed by HR-MAS NMR spectroscopy[J].Scientific Reports,2013,3:2896.
    [59]Rosa JMDL,Martinsanchez PM,Sanchezcortes S,et al.Structure of melanins from the fungi Ochroconis lascauxensis and Ochroconis anomala contaminating rock art in the Lascaux Cave[J].Sci Rep,2017,7(1):13441.
    [60]Sanmartín P,Dearaujo A,Vasanthakumar A,et al.Feasibility study involving the search for natural strains of microorganisms capable of degrading graffiti from heritage materials[J].International Biodeterioration&Biodegradation,2015,103:186-190.
    [61]Bosch-Roig P,Ranalli G.The safety of biocleaning technologies for cultural heritage[J].Frontiers in Microbiology,2014,5(5):155.
    [62]Valentini F,Diamanti A,Palleschi G.New bio-cleaning strategies on porous building materials affected by biodeterioration event[J].Applied Surface Science,2010,256(22):6550-6563.
    [63]GioventùE,Lorenzi PF,Villa F,et al.Comparing the bioremoval of black crusts on colored artistic lithotypes of the Cathedral of Florence with chemical and laser treatment[J].International Biodeterioration&Biodegradation,2011,65(6):832-839.
    [64]Lustrato G,Alfano G,Andreotti A,et al.Fast biocleaning of mediaeval frescoes using viable bacterial cells[J].International Biodeterioration&Biodegradation,2012,69(4):51-61.
    [65]Mazzoni M,Alisi C,Tasso F,et al,Laponite micro-packs for the selective cleaning of multiple coherent deposits on wall paintings:The case study of Casina Farnese on the Palatine Hill(Rome-Italy)[J].International Biodeterioration&Biodegradation,2014,94:1-11.
    [66]闫丽,武望婷.生物技术对丝织文物清洗保护研究初探[J].首都博物馆论丛,2008,(22):445-455.
    [67]孙延忠,陈青.微生物技术在文物保护中的应用研究述略[J].文物保护与考古科学,2008,20(3):68-72.
    [68]杨钻,程晓辉.劣化古建砖石砌体的微生物注浆加固试验研究[J].工业建筑,2015,(7):48-53.
    [69]Villa F,Cappitelli F.Plant-derived bioactive compounds at sub-lethal concentrations:towards smart biocide-free antibiofilm strategies[J].Phytochemistry Reviews,2013,12(1):245-254.
    [70]Jeong SH,Lee HJ,Kim DW,et al.New biocide for ecofriendly biofilm removal on outdoor stone monuments[J].International Biodeterioration&Biodegradation,2018,131:19-28.
    [71]Borrego S,Vald2s O,Vivar I,et al.Essential oils of plants as biocides against microorganisms isolated from Cuban and Argentine documentary heritage[J].Isrn Microbiology,2012(1):826786.
    [72]李文茹,施庆珊,谢小保,等.植物精油化学成分及其抗菌活性的研究进展[J].微生物学通报,2016,43(6):1339-1344.
    [73]Harandi D,Ahmadi H,Achachluei MM.Comparison of Ti O2,and Zn O nanoparticles for the improvement of consolidated wood with polyvinyl butyral against white rot[J].International Biodeterioration&Biodegradation,2016,108:142-148.
    [74]Ruffolo SA,Leo FD,Ricca M,et al.Medium-term in situ,experiment by using organic biocides and titanium dioxide for the mitigation of microbial colonization on stone surfaces[J].International Biodeterioration&Biodegradation,2017,123:17-26.
    [75]Pinna D,Galeotti M,Perito B,et al.Barbara Salvadori In situ long-term monitoring of recolonization by fungi and lichens after innovative and traditional conservative treatments of archaeological stones in Fiesole(Italy)[J].International Biodeterioration&Biodegradation,2018,132:49-58.
    [76]Mascalchi M,Osticioli I,Riminesi C,et al.Preliminary investigation of combined laser and microwave treatment for stone biodeterioration[J].Studies in Conservation,2015,60(Supp1):S19.
    [77]Calvo AMDC,Docters A,Miranda MV,et al.The use of gamma radiation for the treatment of cultural heritage in the Argentine National Atomic Energy Commission:past,present,and future[M].Applications of radiation chemistry in the fields of industry,biotechnology and environment.Springer International Publishing,2017:9.
    [78]姚娜,习永惠,吴若菲,等.纸质文物防霉、除霉保护技术探讨[J].北京印刷学院学报,2016,24(4):14-17.
    [79]Cappitelli F,Pasquariello G,Tarsitani G,et al.Scripta manent?Assessing microbial risk to paper heritage[J].Trends in Microbiology,2010,18(12):538-542.
    [80]Liu X,Meng H,Wang Y,et al.Water is a critical factor in evaluating and assessing microbial colonization and destruction of Angkor sandstone monuments[J].International Biodeterioration&Biodegradation,2018,133:9-16.
    [81]Sterflinger K,Little B,Pinar G,et al.Future directions and challenges in biodeterioration research on historic materials and cultural properties[J].International Biodeterioration&Biodegradation,2018,129:10-12.

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