By the karst dynamic system theory, the Kcs is controlled by groundwater discharge and HCO-3 mass concentration. The BanzhaiRiver catchment, located in Maolan National Nature Reserve of Guizhou Province, was chosen as the study area. By the auto-monitoring technique, the discharge and water chemistry data of BanzhaiRiver catchment were obtained. Based on the analysis of relationship between discharge, HCO-3 concentration and karst carbon sequestration under different precipitation conditions including storm period, no/weak precipitation period and dry season. Kcs has positive correlation with discharge and negative correlation with HCO-3 concentration.