Screening of repetitive motifs inside the genome of the flat oyster (Ostrea edulis): Transposable elements and short tandem repeats
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- 作者：Manuel Veraa ; b ; 1 ; manuel.vera@usc.es" class="auth_mail" title="E-mail the corresponding author ; manuel.verar@udg.edu" class="auth_mail" title="E-mail the corresponding author ; Xabier Belloc ; d ; 1 ; Jose-Antonio Á ; lvarez-Diose ; Belen G. Pardoa ; Laura Sá ; ncheza ; Jens Carlssonf ; g ; Jeanette E.L. Carlssong ; Carolina Bartolomé ; c ; d ; Xulio Masidec ; d ; Paulino Martineza
- 关键词：Genome resources ; Ostrea edulis ; Transposable elements ; Short tandem repeats ; Microsatellite validation
- 刊名：Marine Genomics
- 出版年：2015
- 出版时间：December 2015
- 年：2015
- 卷：24
- 期：part_P3
- 页码：335-341
- 全文大小：340 K
文摘
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We study repetitive elements inside flat oyster (Ostrea edulis) genome.
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We perform the first analysis of transposable elements (TEs) in O. edulis.
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Detected TEs were identified in other oyster species and were actively transcribed.
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Tri- and tetranucleotide repeat motifs were the most abundant in O. edulis genome.
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We develop 14 microsatellite loci mainly associated to genes.