The regulation of apoptosis involves a complicated cascade requiring numerous protein interactions including the pro-apoptotic executioner protein caspase-3 and the anti-apoptotic calcium-binding protein
calbindin-
D28K. Using isothermal titration calorimetry, we show that
calbindin-D28K binds caspase-3 in a Ca
2+-dependent fashion. Molecular docking and conformational sampling studies of the Ca
2+-loaded capase-3/
calbindin-D28K interaction were performed in order to isolate potentially crucial intermolecular contacts. Residues in the active site loops of caspase-3 and EF-hands 1 and 2 of
calbindin-D28K were shown to be critical to the interaction. Based on these studies, a model is proposed to help understand how
calbindin-D28K may deactivate caspase-3 upon binding.
Structured summary of protein interactions
and by