Noncontiguous finished genome sequence and description of Prevotella phocaeensis sp. nov., a new anaerobic species isolated from human gut infected by Clostridium difficile

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• 作者：P. Afouda¹ ; S. Ndongo¹ ; S. Khelaifia¹ ; N. Labas¹ ; F. Cadoret¹ ; F. Di Pinto¹ ; J. Delerce¹ ; D. Raoult¹ ; ² ; M. Million¹ ; ^{matthieumillion@gmail.com}
• 关键词：Clostridium difficile ; culturomics ; gut microbiota ; Prevotella phocaeensis ; taxonogenomics
• 刊名：New Microbes and New Infections
• 出版年：2017
• 出版时间：January 2017
• 年：2017
• 卷：15
• 期：Complete
• 页码：117-127
• 全文大小：1228 K
• 卷排序：15

文摘

Prevotella phocaeensis sp. nov. strain SN19T (= DSM 103364) is a new species isolated from the gut microbiota of patient with colitis due to Clostridium difficile. Strain SN19T is Gram-negative rod-shaped bacteria, strictly anaerobic, nonmotile and non–endospore forming. The predominance fatty acid is hexadecanoic acid. Its 16S rRNA showed a 97.70% sequence identity with its phylogenetically closest species, Prevotella oralis. The genome is 2 922 117 bp long and contains 2486 predicted genes including 56 RNA genes.