In this work the removal efficiency of commercial activated carbon filters for biogas filtering upstream of an SOFC was investigated using a Proton Transfer Reaction-Mass Spectrometry instrument (PTR-MS). In particular, we tested sulfur compounds by focusing on the effect of co-vapor adsorption (aromatic, carbonyl and chloro-compounds which are biogas pollutants) on filter performance. The results demonstrate the applicability of PTR-MS for investigating covapor effects which are of practical relevance for SOFC development.