1010-lbp: Simulation of potential stem cell donor searches: Available matching donor is not always identified

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• 作者：Jü ; rgen Sauter¹ ; Ute Solloch¹ ; Jan Hofmann¹ ; Julia Pingel¹ ; Alexander H. Schmidt¹ ; Gerhard Ehninger²
• 刊名：Human Immunology
• 出版年：June 2014
• 年：2014
• 卷：75
• 期：6
• 页码：484
• 全文大小：30 K

文摘

The heterogeneous nature of HLA information (missing loci, various typing resolutions) in current donor registries may hamper unrelated donor searches. In our study, we estimated the probability of “worst-case searches”, that happen when registered donors who are 10/10 allele-level matches to patients in need of a transplant are not identified in the search process.

Methods

For that purpose, we generated a virtual donor file with d = 2,600,000 donors based on 5-locus high-resolution (HR) haplotype frequencies (HF) of the German population. HF had been estimated from a very large sample (n = 370,856). Each virtual donor was assigned randomly to one of 5 typing levels, ranging from level 1 (28% of all donors, HLA loci A, B, C, DRB1 and DQB1 typed at HR) to level 5 (17%, only HLA-A and -B typed at low resolution). The resulting file is a simplified model of DKMS Bone Marrow Donor Center (reference model). With the same HF, we also generated p = 10,000 virtual patients. Within donor searches for these patients, virtual HLA typings of incompletely typed donors could be requested based on matching probabilities. As typing result, the donor’s known HLA information was uncovered.

To assess their importance, we varied input parameters of our simulation, such as the number of allowed virtual typings and of donors in the file, the distribution of typing levels, and the diversity of the HF-distribution.

Results

In the reference model, no HLA-matched donor(s) could be identified for 2.7% (1.8%) of the patients if 3 (10) virtual typings were allowed.

We found that these ratios are most strongly influenced by the distribution of typing levels and least by the donor file size. We also observed that when donors of level 5 are ignored during virtual typings, some patients remain without donors irrespective of the number of virtual typings allowed.

Conclusions

In order to minimize the number of “worst-case searches”, registries should type new donors with the highest resolution available and for all relevant HLA-Loci.