The complete mitogenomes of Calameuta filiformis (Eversmann, 1847) and Calameuta idolon (Rossi, 1794) (Hymenoptera: Cephidae): The remarkable features of the elongated A + T rich region in Cephini
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- 作者：E. Mahir Korkmaza ; ekorkmaz@cumhuriyet.edu.tr" class="auth_mail" title="E-mail the corresponding author ; Mahir Budaka ; Merve Nur Ö ; rdeka ; Hasan Hü ; seyin Başıbü ; yü ; kb
- 关键词：Cl. idolon ; Calamauta idolon ; Cl. filiformis ; Calamauta filiformis ; T. iudaicus ; Trachelus iudaicus ; C. cinctus ; Cephus cinctus ; bp ; base pair ; PCGs ; protein coding genes ; rRNA ; ribosomal RNA ; tRNA ; transfer RNA ; A ; + ; T-rich region ; adenine ; + ; thymine-rich region ; TDRs ; tandem repeat sequences ; PCR ; polymerase chain reaction ; NGS ; next generation sequencing ; ORF ; open reading frame ; IQM cluster ; trnI ; trnQ ; trnM gene cluster ; atp6 and atp8 genes ; ATP synthase subunits 6 and 8
- 刊名：Gene
- 出版年：2016
- 出版时间：15 January 2016
- 年：2016
- 卷：576
- 期：1
- 页码：404-411
- 全文大小：696 K
文摘
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The complete mitogenomes of stem borers, Calameuta filiformis and Cl. idolon, are sequenced and characterised.
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A rearrangement in IQM gene cluster and a length expansion in rrnS gene are suggested as synapomorphies for Cephini.
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A remarkable length increase is also observed in their A + T rich region.
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Characterisation of the A + T-rich region reveals the presence of the tRNA- and rRNA-like sequences and tandem repeats.
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Short tandem repeats are suggested replication fork barrier in insects for the first time.