Functional annotation of putative hypothetical proteins from Candida dubliniensis
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- 作者：Kundan Kumar ; Amresh Prakash ; Munazzah Tasleem ; Asimul Islam ; Faizan Ahmad ; Md. Imtaiyaz Hassan ; mihassan@jmi.ac.in" class="auth_mail
- 关键词：HP ; hypothetical protein ; BLAST ; basic local alignment search tool ; PSI-BLAST ; position specific iterative basic local alignment search tool ; HMMTOP ; prediction of transmembrane helices and topology of proteins ; TMHMM ; membrane protein topology prediction method based on a hidden Markov model ; CATH ; class ; architecture ; topology and homology ; GRAVY ; grand average of hydropathicity ; CDD ; Conserved Domain Database ; SMART ; simple modular architecture research tool ; PANTHER ; Protein ANalysis THrough
- 刊名：Gene
- 出版年：10 June 2014
- 年：2014
- 卷：543
- 期：1
- 页码：93-100
- 全文大小：545 K
文摘
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Hypothetical proteins from the C. dubliniensis genome were annotated.
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Latest versions of several bioinformatics tools were used to assign the function.
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Function of 27 hypothetical proteins was successfully assigned.
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These findings will be helpful to understand Candidial pathogenesis precisely.