Reversible polymorphism-aware phylogenetic models and their application to tree inference
详细信息 查看全文
- 作者：Dominik Schrempfa ; b ; dominik.schrempf@vetmeduni.ac.at" class="auth_mail" title="E-mail the corresponding author ; Bui Quang Minhc ; Nicola De Maiod ; e ; Arndt von Haeselerc ; Carolin Kosiola ; carolin.kosiol@vetmeduni.ac.at" class="auth_mail" title="E-mail the corresponding author
- 关键词：Species tree ; Phylogenetics ; Incomplete lineage sorting ; Substitution model ; Reversible polymorphism-aware phylogenetic model
- 刊名：Journal of Theoretical Biology
- 出版年：2016
- 出版时间：21 October 2016
- 年：2016
- 卷：407
- 期：Complete
- 页码：362-370
- 全文大小：848 K
文摘
- •
Species tree inference from genome-wide population data.
- •
Takes incomplete lineage sorting into account.
- •
Analytical solution of stationary distribution and formal proof of reversibility.
- •
Reversibility ensures swiftness and stability.
- •
Increase of sample size per species improves estimations without raising runtime.
- •
Comparison to the Wright-Fisher diffusion.