IsoSeq analysis and functional annotation of the infratentorial ependymoma tumor tissue on PacBio RSII platform
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- 作者：Neetu Singha ; neetuaashi@yahoo.com" class="auth_mail" title="E-mail the corresponding author ; Dinesh Kumar Sahub ; Rebecca Chowdhryc ; Archana Mishrad ; Madhu Mati Goele ; Mohd Faheemf ; Chhitij Srivastavaf ; Bal Krishna Ojhaf ; Devendra Kumar Guptag ; Ravi Kanth
- 关键词：Ependymoma ; Isoseq ; PacBio ; Annotation
- 刊名：Meta Gene
- 出版年：2016
- 出版时间：February 2016
- 年：2016
- 卷：7
- 期：Complete
- 页码：70-75
- 全文大小：1105 K
文摘
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Produced 2952 unique protein accessions in the nr protein database
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Identified 307 KEGG-pathways with 442 enzyme-codes for 1172 unique-sequences
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Identified transcript cluster-IDs in Level-2 and -3 GO-terms with alternative splicing index
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Involvement of PNMT, SNN and LAMB1-brain specific genes in Ependymoma