Genomic diversity and phylogenetic relationships of human papillomavirus 16 (HPV16) in Nepal

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• 作者：Robert Makowsky^a ; ¹ ; Pema Lhaki^b ; Howard W. Wiener^c ; Madhav P. Bhatta^d ; Michael Cullen^e ; ^f ; Derek C. Johnson^c ; Rodney T. Perry^c ; Mingma Lama^b ; Joseph F. Boland^e ; ^f ; Meredith Yeager^e ; ^f ; Sarita Ghimire^g ; Thomas R. Broker^h ; Sadeep Shrestha^c ; ^{sshrestha@uab.edu}
• 关键词：HPV16 sequence ; Nepal ; Phylogenetic tree ; HSIL ; HPV16 lineage
• 刊名：Infection, Genetics and Evolution
• 出版年：2016
• 出版时间：December 2016
• 年：2016
• 卷：46
• 期：Complete
• 页码：7-11
• 全文大小：299 K
• 卷排序：46

文摘

First report of HPV16 deep-sequencing from Nepal HSIL subjects did not contain HPV lineages that clustered together phylogenetically Phylogeny based on two marginalized populations from two distinct regions in Nepal HPV16 sequences from samples were closely related to HPV lineages “A”, “C” and “D”.