The overall prevalence of Cryptosporidium in goats was 3.48% (44/1256).
C. ubiquitum, C. andersoni and C. xiaoi were identified.
The zoonotic XIIa subtype 2 of C. ubiquitum was found.
C. ubiquitum and C. andersoni were the first identified species in goats.
Age-associated distribution of Cryptosporidium was noticed in goats.