De novo transcriptome analysis of Thitarodes jiachaensis before and after infection by the caterpillar fungus, Ophiocordyceps sinensis
详细信息 查看全文
- 作者：Shaosong Li1 ; Xin Zhong ; 1 ; zhongxin@mail.sysu.edu.cn" class="auth_mail" title="E-mail the corresponding author ; Xutian Kan ; Li Gu ; Hongxia Sun ; Guren Zhang ; Xin Liu ; lsslx@mail.sysu.edu.cn" class="auth_mail" title="E-mail the corresponding author
- 关键词：AMP ; antimicrobial peptide ; PRR ; pattern recognition receptor ; βGRP ; β-1 ; 3-glucan recognition protein ; apoLp-III ; apolipophorin III ; RNA-Seq ; RNA sequencing ; Nr ; NCBI non-redundant protein sequences ; Nt ; NCBI non-redundant nucleotide sequences ; Pfam ; Protein family ; KOG/COG ; Eukaryotic Ortholog Groups/Clusters of Orthologous Groups of proteins ; KEGG ; Kyoto Encyclopedia of Genes and Genome ; KO ; KEGG Ortholog database ; GO ; Gene Ontology ; KAAS ; KEGG Automatic Annotation Server ; DEG ; differentially
- 刊名：Gene
- 出版年：2016
- 出版时间：15 April 2016
- 年：2016
- 卷：580
- 期：2
- 页码：96-103
- 全文大小：981 K
文摘
- •
Thitarodes jiachaensis is a host species of Ophiocordyceps sinensis.
- •
O. sinensis is valued for its medicinal properties.
- •
Transcriptome analysis presented early development of Thitarodes genomics.
- •
Candidate genes in the response of T. jiachaensis to O. sinensis infection.