In this program the geometric structures and electronic transport properties of a series of (GaAs)n () clusters are comparatively studied using non-equilibrium Green?s function (NEGF) combined with density functional theory (DFT). It is find that all the GaAs nanocluster-based molecular junctions show metallic behavior at low biases () while negative differential resistance (NDR) appears at a certain high bias range. Our calculation shows that the current of (GaAs)3 nanocluster-based molecular junction is almost the smallest at any bias. The mechanisms of the current-voltage characteristics of all the three molecular junctions are proposed.