Combined use of network inference tools identifies ecologically meaningful bacterial associations in a paddy soil

详细信息    查看全文

• 作者：Honggui Wang^a ; ^b ; Zhong Wei^c ; Lijuan Mei^b ; Jingxin Gu^b ; Suisui Yin^b ; Karoline Faust^d ; ^e ; ^f ; ¹ ; Jeroen Raes^d ; ^e ; ^f ; Ye Deng^g ; Yulong Wang^a ; Qirong Shen^c ; ¹ ; Shixue Yin^b ; ¹ ; ^{sxyin@yzu.edu.cn}
• 关键词：Soil microbial community ; Interaction network inference ; Ecologically meaningful interactions ; Paddy soil
• 刊名：Soil Biology and Biochemistry
• 出版年：2017
• 出版时间：February 2017
• 年：2017
• 卷：105
• 期：Complete
• 页码：227-235
• 全文大小：1612 K
• 卷排序：105

文摘

We used three computational tools to infer bacterial interactions in paddy soils. We captured a guild associated with aerobic respiration and fermentation. We captured a guild associated with metal/sulphur cycles. We validated 3 interactions but their interaction types differed from those inferred.