Proteome scale census of major facilitator superfamily transporters in Trichoderma reesei using protein sequence and structure based classification enhanced ranking
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- 作者：Nitika Chaudharya ; Indu Kumaria ; Padmani Sandhub ; Mushtaq Ahmeda ; mushtaq.cuhp@gmail.com" class="auth_mail" title="E-mail the corresponding author ; mushtaq@cuhimachal.ac.in" class="auth_mail" title="E-mail the corresponding author ; Yusuf Akhterb ; yusuf@daad-alumni.de" class="auth_mail" title="E-mail the corresponding author ; yusuf@cuhimachal.ac.in" class="auth_mail" title="E-mail the corresponding author
- 关键词：MFS ; major facilitator superfamily ; BCAs ; bio-control agents ; SP ; sugar porter ; DHA-1 ; drug ; H+ antiporter-1 ; MCP ; monocarboxylate porter ; ACS ; anion ; cation symporter ; DHA-2 ; drug ; H+ antiporter-2 ; SHS ; sialate ; H+ symporter ; OCT ; organic cation transporter ; PHS ; phosphate ; H+ symporter ; YnfM ; acriflavin &mdash ; sensitivity transporter ; V-BAAT ; vacuolar basic amino acid transporter ; TMHs ; transmembrane helices ; PDB ; protein data bank ; ABC ; ATP-binding cassette ; TCDB ; transporter classification
- 刊名：Gene
- 出版年：2016
- 出版时间：1 July 2016
- 年：2016
- 卷：585
- 期：1
- 页码：166-176
- 全文大小：1986 K
文摘
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Major facilitator superfamily transporters from bio-control agent T. reesei proteome
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448 proteins out of 9115 were detected to carry transmembrane helices.
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148 proteins belong to 10 distinct families of MFS based on phylogeny and functions.
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3D structure of these families illustrated mechanism of membrane transport.
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Molecular basis of bio-fertilizing metabolite transport and secretion