Survey and analysis of simple sequence repeats in the Ustilaginoidea virens genome and the development of microsatellite markers
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- 作者：Mina Yua ; b ; Junjie Yua ; Huanhuan Lia ; Yahui Wanga ; Xiaole Yina ; Huiwen Boa ; c ; Hui Dinga ; c ; Yuxin Zhoua ; Yongfeng Liua ; b ; liuyf@jaas.ac.cn" class="auth_mail" title="E-mail the corresponding author
- 关键词：AFLP ; amplified fragment length polymorphism ; bp ; base pair ; CDS ; coding sequence ; CTAB ; cetyltrimethyl ammonium bromide ; dNTP ; deoxy-ribonucleotide triphosphate ; ERIC ; enterobacterial repetitive intergenic consensus ; GO ; Gene Ontology ; NCBI ; National Center for Biotechnology Information ; PCR ; polymerase chain reaction ; PDB ; potato-dextrose broth medium ; PDA ; potato-dextrose-agar medium ; RAPD ; random amplified polymorphic DNA ; RFS ; rice false smut ; SNP ; single nucleotide polymorphism ; SSR ; simpl
- 刊名：Gene
- 出版年：2016
- 出版时间：1 July 2016
- 年：2016
- 卷：585
- 期：1
- 页码：28-34
- 全文大小：900 K
文摘
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We analyzed SSR distribution in U. virens genome for the first time.
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We compared the SSRs in U. virens with seven other fungal genomes.
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Six selected primers showed high polymorphism in U. virens.