De novo assembly and analysis of tissue-specific transcriptomes revealed the tissue-specific genes and profile of immunity from Strongylocentrotus intermedius
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- 作者：Yadong Chena ; b ; Yaqing Changa ; Xiuli Wanga ; Xuemei Qiua ; Yang Liua ; liuy78@foxmail.com" class="auth_mail" title="E-mail the corresponding author
- 关键词：Strongylocentrotus intermedius ; Transcriptome ; Differentially expressed genes ; Immune-related genes
- 刊名：Fish & Shellfish Immunology
- 出版年：2015
- 出版时间：October 2015
- 年：2015
- 卷：46
- 期：2
- 页码：723-736
- 全文大小：1842 K
文摘
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Tissues-specific transcriptome of Strongylocentrotus intermedius was sequenced for the first time.
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In total 96,764 contigs within 24,778 gene families in S. intermedius were annotated.
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Potential tissue-specific pathways progressed in different tissues were annotated.
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In S. intermedius, 1074 (4.3% of all genes) genes were annotated as defending genes.
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Coelomocytes is the main immune monitor, complement is very important in S. intermedius.