Resonance Raman spectra of recombinant human green andred cone pigments have beenobtained to examine the molecular mechanism of color recognition byvisual pigments. Spectra wereacquired using a 77 K resonance Raman microprobe or preresonance Ramanspectroscopy. The vibrationalbands were assigned by comparison to the spectra of bovine rhodopsinand model compounds. The C=NHstretching frequencies of rhodopsin, the green cone pigment, and thered cone pigment in H
2O (D
2O) arefound at 1656 (1623),
1640 (1618), and
1644cm
-1, respectively. Together withprevious resonanceRaman studies on iodopsin [Lin, S. W., Imamoto, Y., Fukada, Y.,Shichida, Y., Yoshizawa, T., & Mathies,R. A. (1994)
Biochemistry 33, 2151-2160], these valuessuggest that red and green pigments have verysimilar Schiff base environments, while the Schiff base group inrhodopsin is more strongly hydrogen-bonded to its protein environment. The absence of significantfrequency and intensity differences ofmodes in the fingerprint and the hydrogen out-of-plane wagging regionsfor all these pigments does notsupport the hypothesis that local chromophore interactions with chargedprotein residues and/orchromophore planarization are crucial for the absorption differencesamong these pigments. However,our data are consistent with the idea that the Schiff base group inblue visual pigments is stabilized byprotein and water dipoles and that the removal of this dipolar fieldshifts the absorption maximum fromblue to green. A further red shift of the
max fromthe green to the red pigment is successfully modeledby the addition of hydroxyl-bearing amino acids (Ser
164,Tyr
261, and Thr
269) close to the ionone ringthatlower the transition energy by interacting with the change of dipolemoment of the chromophore uponexcitation. The increased hydrogen bonding of the protonatedSchiff base group in rhodopsin is predictedto account for the 30 nm blue shift of its absorption maximum comparedto that of the green pigment.