The study of factors essential for protein鈭抪eptide interactions and protein pore-mediated peptide transport are of particular relevance in biology. Wild-type 伪-hemolysin was adopted as a 鈥渘anoreactor鈥?in which perturbations of the current through a protein containing a lumen-residing, aryl-capped antimicrobial peptide were seen for the first time and studied at the single-molecule level. Energy and steric considerations hint that Met-aryl interactions between aromatic residues placed at a peptide鈥檚 extremities and any of the methionines lining the 伪-hemolysin constriction region may be the primary cause of peptide stabilization within the lumen and may be particularly important to the peptide鈭捨?hemolysin interaction.