The mechanism of inhibition and reactivation of chloroplast ATP-synthase by the fungalcyclotetrapeptide tentoxin was investigated by photolabeling experiments, binding studies, and kineticanalysis using synthetic analogues of tentoxin. The
-subunit of chloroplast F
1-ATPase (CF
1) wasspecifically labeled by a photoactivatable tentoxin derivative, providing the first direct evidence of tentoxinbinding to the
-subunit, and 3D homology modeling was used to locate tentoxin in its putative bindingsite at the
/
interface. The nonphotosynthetic F
1-ATPase from thermophilic bacterium (TF
1) proved tobe also tentoxin-sensitive, and enzyme turnover dramatically increased the rate of tentoxin binding to itsinhibitory site, contrary to what was previously observed with
-depleted CF
1 [
Santolini, J., Haraux, F.,Sigalat, C., Moal, G., and
Andr&
eacute;, F. (1999)
J. Biol. Chem. 274, 849-858]. We propose that tentoxinpreferentially binds to an ADP-loaded
pair, and mechanically blocks the catalytic cycle, perhaps bythe impossibility of converting this
pair into an ATP-loaded
pair. Using
14C-tentoxin and selectedsynthetic analogues, we found that toxin binding to the tight inhibitory site of CF
1 exerts some cooperativeeffect on the loose reactivatory site, but that no reciprocal effect exists. When the two tentoxin-bindingsites are filled in reactivated F
1-ATPase, they do not exchange their role during catalytic turnover, indicatingan impairment between nucleotide occupancy and the shape of tentoxin-binding pocket. This analysisprovides a mechanical interpretation of the inhibition of F
1-ATPase by tentoxin and a clue for understandingthe reactivation process.