The effects of aromatic stacking interactions on the stabilization of re
duce
d flavin a
denine
dinucleoti
de (FAD) an
d substrate/pro
duct have been investigate
d in short-chain acyl-coenzyme A
dehy
drogenase (SCAD) from
Megasphaera elsdenii. Mutations were ma
de at the aromatic resi
dues Phe160an
d Tyr366, which flank either face of the noncovalently boun
d flavin cofactor. The electrochemicalproperties of the mutants were then measure
d in the presence an
d absence of a butyryl-CoA/crotonyl-CoA mixture. Results from these re
dox stu
dies suggest that the phenylalanine an
d tyrosine both engagein favorable
![](/images/gifchars/pi.gif)
-
![](/images/gifchars/sigma.gif)
interactions with the isoalloxazine ring of the flavin to help stabilize formation of theanionic flavin hy
droquinone. Disruption of these interactions by replacing either resi
due with a leucine(F160L an
d Y366L) causes the mi
dpoint potential for the oxi
dize
d/hy
droquinone couple (
Eox/hq) to shiftnegative by 44-54 mV. The
Eox/hq value was also foun
d to
decrease when aromatic resi
dues containingelectron-
donating heteroatoms were intro
duce
d at the 160 position. Potential shifts of -32 an
d -43 mVfor the F160Y an
d F160W mutants, respectively, are attribute
d to increase
d ![](/images/gifchars/pi.gif)
-
![](/images/gifchars/pi.gif)
repulsive interactionsbetween the ring systems. This stu
dy also provi
des evi
dence for thermo
dynamic regulation of the substrate/pro
duct couple in the active site of SCAD. Bin
ding to the wil
d-type enzyme cause
d the mi
dpoint potentialfor the butyryl-CoA/crotonyl-CoA couple (
EBCoA/CCoA) to shift 14 mV negative, stabilizing the oxi
dize
dpro
duct. Formation of pro
duct was foun
d to be even more favorable in complexes with the F160Y an
dF160W mutants, suggesting that the electrostatic environment aroun
d the flavin plays a role in substrate/pro
duct activation.