Proton pumping nicotinamide nucleotide transhydrogenase from
Escherichia coli contains an
subunit with the NAD(H)-binding domain I and a
subunit with the NADP(H)-binding domain III.The membrane domain (domain II) harbors the proton channel and is made up of the hydrophobic partsof the
and
subunits. The interface in domain II between the
and the
subunits has previously beeninvestigated by cross-linking loops connecting the four transmembrane helices in the
subunit and loopsconnecting the nine transmembrane helices in the
subunit. However, to investigate the organization ofthe nine transmembrane helices in the
subunit, a split was introduced by creating a stop codon in theloop connecting transmembrane helices 9 and 10 by a single mutagenesis step, utilizing an existingdownstream start codon. The resulting enzyme was composed of the wild-type
subunit and the twonew peptides
1 and
2. As compared to other split membrane proteins, the new transhydrogenase wasremarkably active and catalyzed activities for the reduction of 3-acetylpyridine-NAD
+ by NADPH, thecyclic reduction of 3-acetylpyridine-NAD
+ by NADH (mediated by bound NADP(H)), and proton pumping,amounting to about 50-107% of the corresponding wild-type activities. These high activities suggestthat the
subunit was normally folded, followed by a concerted folding of
1 +
2. Cross-linking of a
S105C-
S237C double cysteine mutant in the functional split cysteine-free background, followed bySDS-PAGE analysis, showed that helices 9, 13, and 14 were in close proximity. This is the first timethat cross-linking between helices in the same
subunit has been demonstrated.