A technique with subpicomolar sensitivity was developedfor analyzin
g O
-linked oli
gosaccharides released from
glycoproteins separated by
gel electrophoresis. The protocol involves
gel electrophoresis, electroblottin
g to poly(vinylidene fluoride) membrane, reductive
![](/ima<font color=)
ges/
gifchars/beta2.
gif" BORDER=0 ALIGN="middle">-elimination,and analysis of released oli
gosaccharides by liquid chromato
graphy coupled to ne
gative ion electrospray massspectrometry. It was also found that N-linked oli
gosaccharides could be recovered under the same conditions,found both as free oli
gosaccharides and as distinct
glycopeptides created from reductive cleava
ge of the proteinbackbone,
givin
g some information on site-specific
glycosylation. The method was used to demonstrate that thedifference between human
![](/ima<font color=)
ges/
gifchars/alpha.
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glycoprotein isoformsseparated by 2D-
gel electrophoresis was partially due tosialylation of both O
-linked and N-linked oli
gosaccharides.It was also shown that both acidic and neutral oli
gosaccharides could be recovered and analyzed simultaneouslyfrom hi
gh molecular mass (200 000-5 000 000 Da)hi
ghly
glycosylated mucin
glycoproteins collected fromsmall intestine and saliva and separated by sodiumdodecyl sulfate-a
garose/polyacrylamide composite
gels.Mass spectrometric data not only
gave information aboutthe mass distribution of the hetero
geneous mixtures ofoli
gosaccharides from [M -
xH]
x- ions but also
gaveinformation about the isomeric hetero
geneity of the oli
gosaccharides from their resolution by porous
graphitizedcarbon chromato
graphy. Tandem mass spectrometry wasexplored as a technique for distin
guishin
g between oli
gosaccharide isomers with different sequences and alsobetween oli
gosaccharides with the same sequence butwith different linka
ge confi
gurations.