The acyl-CoA dehydrogenases are a family of flavoenzymes withsimilar structure and functioninvolved in the metabolism of fatty acids and branched chain aminoacids. The degree of overlap insubstrate specificity is narrow among these enzymes. The positionof the catalytic glutamate, identifiedas Glu376 in porcine medium chain acyl-CoA dehydrogenase (MCAD), Glu254in human isovaleryl-CoA dehydrogenase (IVD), and Glu261 in human long chain acyl-CoAdehydrogenase (LCAD), hasbeen suggested to affect substrate chain length specificity. Inthis study,
in vitro site-directed mutagenesiswas used to investigate the effect of changing the position of thecatalytic carboxylate on substrate specificityin short chain acyl-CoA dehydrogenase (SCAD). Glu368, thehypothetical active site catalytic residue ofrat SCAD, was replaced with Asp, Gly, Gln, Arg, and Lys and the wildtype and mutant SCADs wereproduced in
Escherichia coli and purified. Therecombinant wild type SCAD
kcat/
Km values forbutyryl-,hexanoyl-, and octanoyl-CoA were 220, 22, and 3.2
![](/images/entities/mgr.gif)
M
-1 min
-1,respectively, while the Glu368Aspmutant gave
kcat/
Km of81, 12, and 1.4
![](/images/entities/mgr.gif)
M
-1min
-1, respectively, for the same substrates.None of theother mutants exhibited enzyme activity. A Glu368Gly/Gly247Gludouble mutant enzyme, which placesthe catalytic residue at a position homologous to that of LCAD, wasalso synthesized and purified. Itshowed
kcat/
Km of 9.3,2.8, and 1.5
![](/images/entities/mgr.gif)
M
-1min
-1 with butyryl-, hexanoyl-, andoctanoyl-CoA used assubstrates, respectively. These results confirm the identity ofGlu368 as the catalytic residue of rat SCADand suggest that alteration of the position of the catalyticcarboxylate can modify substrate specificity.