Neuroligins 1-4 are postsynaptic transmembrane proteins capable of initiating presynapticmaturation via interactions with
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-neurexin. Both neuroligins and
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-neurexins have alternatively splicedinserts in their extracellular domains. Using analytical ultracentrifugation, we determined that theextracellular domains of the neuroligins sediment as dimers, whereas the extracellular domains of the
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-neurexins appear monomeric. Sedimentation velocity experiments of titrated stoichiometry ratios of
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-neurexin and neuroligin suggested a 2:2 complex formation. The recognition properties of individualneuroligins toward
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-neurexin-1 (NX1
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), along with the influence of their splice inserts, were exploredby surface plasmon resonance and affinity chromatography. Different neuroligins display a range of NX1
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affinities spanning more than 2 orders of magnitude. Whereas splice insert 4 in
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-neurexin appears to actonly as a modulator of the neuroligin/
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-neurexin association, splice insert B in neuroligin-1 (NL1) is thekey element regulating the NL1/NX1
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binding. Our data indicate that gene selection, mRNA splicing,and post-translational modifications combine to give rise to a controlled neuroligin recognition code witha rank ordering of affinities for particular neurexins that is conserved for the neuroligins across mammalianspecies.