We have developed a new methodology to fabricate high-resolution DNA microarrays (2500 dots/cm
2) incombination with microcontact printing (
![](/images/entities/mgr.gif)
CP) and surface plasmon resonance (SPR) imaging. A novel COOH-terminated PEG-disulfide with
para-carborane (
p-carborane) was synthesized as an initiator chemically boundto a gold substrate for surface coupling reactions with NH
2-terminated DNA. The hybridization betweentarget DNA immobilized on gold nanoparticles and probe DNA arrayed on flat gold substrates was successfullydemonstrated by SPR imaging, where nonspecific adsorption was not observed at the array background. Thegold nanoparticles on the array give quite high contrast even at low surface coverage with gold nanoparticles(~10%) by the enhancement effect of optical signals based on nanoscale phenomena. This enhancementeffect can be well described by the simulation based on the Maxwell-Garnett theory for the effective dielectricconstants and Fresnel's equation.