Allostery and Hysteresis Are Coupled in Human UDP-Glucose Dehydrogenase

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• 作者：Nathaniel R. Beattie ; Nicholas D. Keul ; Andrew M. Sidlo ; Zachary A. Wood
• 刊名：Biochemistry
• 出版年：2017
• 出版时间：January 10, 2017
• 年：2017
• 卷：56
• 期：1
• 页码：202-211
• 全文大小：650K
• ISSN：1520-4995

文摘

Human UDP-glucose dehydrogenase (hUGDH) is regulated by an atypical allosteric mechanism in which the feedback inhibitor UDP-xylose (UDP-Xyl) competes with the substrate for the active site. Binding of UDP-Xyl triggers the T131-loop/α6 allosteric switch, which converts the hexameric structure of hUGDH into an inactive, horseshoe-shaped complex (E^Ω). This allosteric transition buries residue A136 in the protein core to produce a subunit interface that favors the E^Ω structure. Here we use a methionine substitution to prevent the burial of A136 and trap the T131-loop/α6 switch in the active conformation. We show that hUGDH_A136M does not exhibit substrate cooperativity, which is strong evidence that the methionine substitution prevents the formation of the low-UDP-Glc-affinity E^Ω state. In addition, the inhibitor affinity of hUGDH_A136M is reduced 14-fold, which most likely represents the K_i for competitive inhibition in the absence of the allosteric transition to the higher-affinity E^Ω state. hUGDH also displays a lag in progress curves, which is caused by a slow, substrate-induced isomerization that activates the enzyme. Stopped-flow analysis shows that hUGDH_A136M does not exhibit hysteresis, which suggests that the T131-loop/α6 switch is the source of the slow isomerization. This interpretation is supported by the 2.05 Å resolution crystal structure of hUGDH_A136M, which shows that the A136M substitution has stabilized the active conformation of the T131-loop/α6 allosteric switch. This work shows that the T131-loop/α6 allosteric switch couples allostery and hysteresis in hUGDH.