Pantoea pleuroti sp. nov., Isolated from the Fruiting Bodies of Pleurotus eryngii

详细信息    查看全文

• 作者：Yuanwei Ma ; Yonggang Yin ; Chengbo Rong ; Sanfeng Chen ; Yu Liu…
• 刊名：Current Microbiology
• 出版年：2016
• 出版时间：February 2016
• 年：2016
• 卷：72
• 期：2
• 页码：207-212
• 全文大小：429 KB
• 参考文献：1.Alippi AM, Lopez AC (2010) First report of leaf spot disease of maize caused by Pantoea ananatis in Argentina. Plant Dis 94(4):487CrossRef
  2.Brady C, Cleenwerck I, Venter S, Vancanneyt M, Swings J, Coutinho T (2008) Phylogeny and identification of Pantoea species associated with plants, humans and the natural environment based on multilocus sequence analysis (MLSA). Syst Appl Microbiol 31(6–8):447–460PubMed CrossRef
  3.Brady CL, Cleenwerck I, Venter SN, Engelbeen K, De Vos P, Coutinho TA et al (2010) Emended description of the genus Pantoea, description of four species from human clinical samples, Pantoea septica sp. nov., Pantoea eucrina sp. nov., Pantoea brenneri sp. nov. and Pantoea conspicua sp. nov., and transfer of Pectobacterium cypripedii (Hori 1911) Brenner, 1973 emend. Hauben et al. 1998 to the genus as Pantoea cypripedii comb. nov. Int J Syst Evol Microb 60:2430–2440CrossRef
  4.Brady CL, Venter SN, Cleenwerck I, Engelbeen K, Vancanneyt M, Swings J, Coutinho TA (2009) Pantoea vagans sp nov., Pantoea eucalypti sp nov., Pantoea deleyi sp. nov. and Pantoea anthophila sp. nov. Int J Syst Evol Microb 59:2339–2345CrossRef
  5.Brady CL, Cleenwerck I, van der Westhuizen L, Venter SN, Coutinho TA, De Vos P (2012) Pantoea rodasii sp. nov., Pantoea rwandensis sp. nov. and Pantoea wallisii sp. nov., isolated from Eucalyptus. Int J Syst Evol Microbiol 62(7):1457–1464PubMed CrossRef
  6.Carr EA, Bonasera JM, Zaid AM, Lorbeer JW, Beer SV (2010) First report of bulb disease of onion caused by Pantoea ananatis in New York. Plant Dis 94(7):916CrossRef
  7.Choi O, Kim H, Lee Y, Kim J, Moon JS, Hwang I (2012) First report of sheath rot of rice caused by Pantoea ananatis in Korea. Plant Pathol J 28(3):331CrossRef
  8.Cleenwerck I, Vandemeulebroecke K, Janssens D, Swings J (2002) Re-examination of the genus Acetobacter, with descriptions of Acetobacter cerevisiae sp. nov. and Acetobacter malorum sp. nov. Int J Syst Evol Microb 52:1551–1558
  9.Coenye T, Falsen E, Vancanneyt M, Hoste B, Govan JRW, Kersters K, Vandamme P (1999) Classification of Alcaligenes faecalis-like isolates from the environment and human clinical samples as Ralstonia gilardii sp. nov. Int J Syst Bacteriol 49:405–413PubMed CrossRef
  10.Edens DG, Gitaitis RD, Sanders FH, Nischwitz C (2006) First report of Pantoea agglomerans causing a leaf blight and bulb rot of onions in Georgia. Plant Dis 90(12):1551CrossRef
  11.Ezaki T, Hashimoto Y, Yabuuchi E (1989) Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39:224–229CrossRef
  12.Goris J, Suzuki K-I, De Vos P, Nakase T, Kersters K (1998) Evaluation of a microplate DNA-DNA hybridizationmethod compared with the initial renaturation method. Can J Microb 44:1148–1153CrossRef
  13.Gueule D, Fourny G, Ageron E, Le Flèche-Matéos A, Vandenbogaert M, Grimont PA, Cilas C (2015) Pantoea coffeiphila sp. nov., cause of the ‘potato taste’ of Arabica coffee from the African great lakes region. Int J Syst Evol Microbiol 65:23–29PubMed CrossRef
  14.Krawczyk K, Kamasa J, Zwolinska A, Pospieszny H (2010) First report of Pantoea ananatis associated with leaf spot disease of Maize in Poland. J Plant Pathol 92(3):807–811
  15.Lee HB, Hong JP, Kim SB (2010) First report of leaf blight caused by Pantoea agglomerans on rice in Korea. Plant Dis 94(11):1372CrossRef
  16.Liu Y, Wang SX, Zhang DP, Wei SJ, Zhao S, Chen SF, Xu F (2013) Pantoea beijingensis sp. nov., isolated from the fruiting body of Pleurotus eryngii. Antonie Van Leeuwenhoek 104:1039–1047PubMed CrossRef
  17.Mergaert J, Hauben L, Cnockaert MC, Swings J (1999) Reclassification of non-pigmented Erwinia herbicola strains from trees as Erwinia billingiae sp. nov. Int J Sys Bacteriol 49:373–383CrossRef
  18.Mergaert J, Verdonck L, Kersters K (1993) Transfer of Erwinia ananas (synonym, Erwinia uredovora) and Erwinia stewartii to the genus Pantoea emend. as Pantoea ananas (Serrano 1928) comb. nov. and Pantoea stewartii (Smith 1898) comb. nov., respectively, and description of Pantoea stewartii subsp. indologenes subsp. nov. Int J Sys Bacteriol 43:162–173CrossRef
  19.Mesbah M, Premachandran U, Whitman WB (1989) Precise measurement of the G + C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39:159–167CrossRef
  20.Miller MA, Holder MT, Vos RM PE, Liebowitz T, Chan L, Hoover P, Warnow T (2009) The CIPRES Portals. CIPRES URL:http://​www.​phylo.​org/​sub_​sections/​portal . (Archived by WebCite(r) at http://​www.​webcitation.​org/​5imQlJeQa ) Accessed 04 Aug 2009
  21.Morales-Valenzuela G, Silva-Rojas HV, Ochoa-Martinez D, Valadez-Moctezuma E, Alarcon-Zuniga B, Zelaya-Molina LX, Cordova-Tellez L, Mendoza-Onofre L, Vaquera-Huerta H, Carballo-Carballo A, Farfan-Gomez A, Avila-Quezada G (2007) First report of Pantoea agglomerans causing leaf blight and vascular wilt in maize and Sorghum in Mexico. Plant Dis 91(10):1365CrossRef
  22.Naum M, Brown EW, Mason-Gamer RJ (2008) Is 16S rDNA a reliable phylogenetic marker to characterize relationships below the family level in the Enterobacteriaceae? J Mol Evol 66(6):630–642PubMed CrossRef
  23.Niemann S, Pühler A, Tichy H-V, Simon R, Selbitschka W (1997) Evaluation of the resolving power of three different DNA fingerprinting methods to discriminate among isolates of a natural Rhizobium meliloti population. J Appl Microb 82:477–484CrossRef
  24.Posada D (2008) jModelTest: phylogenetic model averaging. Mol Biol Evol 25:1253–1256PubMed CrossRef
  25.Ren YZ, Liu YQ, Ding SL, Li GY, Zhang H (2008) First report of boll rot of cotton caused by Pantoea agglomerants in China. Plant Dis 92(9):1364CrossRef
  26.Swofford DL (2000) PAUP*: Phylogenetic analysis using parsimony (and Other Methods) Version 4.0. Sinauer Associates Inc. Publishers, Sunderland, MA
  27.Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0. Mol Biol Evol 30:2725–2729PubMed PubMedCentral CrossRef
  28.Wilson K (1987) Preparation of genomic DNA frombacteria. In: Moore DD, Seidman JG, Smith JA, Struhl K (eds) Current Protocols in Molecular Biology. Green Publishing & Wiley-Interscience, New York
  29.Yang KQ, Qu WW, Liu X, Liu HX, Hou LQ (2011) First report of Pantoea agglomerans causing brown apical necrosis of Walnut in China. Plant Dis 95(6):773CrossRef
  
• 作者单位：Yuanwei Ma (1) (2)
  Yonggang Yin (3)
  Chengbo Rong (1)
  Sanfeng Chen (4)
  Yu Liu (1)
  Shouxian Wang (1)
  Feng Xu (1)
  
  1. Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing Engineering Research Center for Edible Mushroom, Key Laboratory of Urban Agriculture (North), Ministry of Agriculture, Beijing, 100097, China
  2. College of Food Science and Technology, Shanghai Ocean University, Shanghai, 201306, China
  3. Beijing Zhengxinglong Biotechnology Co., Ltd, Beijing, 102211, China
  4. State Key Laboratory of Agrobiotechnology, China Agricultural University, Beijing, 100193, China
  
• 刊物类别：Biomedical and Life Sciences
• 刊物主题：Life Sciences
  Microbiology
  Biotechnology
  
• 出版者：Springer New York
• ISSN：1432-0991

文摘

Four Gram-negative-staining, facultatively anaerobic bacterial isolates were obtained from the fruiting bodies of the edible mushroom Pleurotus eryngii showing symptoms of bacterial blight disease in Beijing, China. Nearly complete 16S rRNA gene sequencing placed these isolates in the genus Pantoea. Multilocus sequence analysis based on the partial sequences of atpD, gyrB, infB and rpoB revealed Pantoea agglomerans as their closest phylogenetic relatives. DNA–DNA hybridization and phenotypic tests confirmed the classification of the new isolates as a novel species. The name Pantoea pleuroti sp. nov. [type strain KCTC 42084T = CGMCC 1.12894T = JZB 2120015T] is proposed.