Functional investigation of two 1-aminocyclopropane-1-carboxylate (ACC) synthase-like genes in the moss
详细信息    查看全文
  • 作者:Lifang Sun ; Hui Dong ; Nasrullah ; Yuanyuan Mei ; Ning Ning Wang
  • 关键词:Ethylene ; Physcomitrella patens ; ACS ; PpACS ; Like ; C ; S lyase
  • 刊名:Plant Cell Reports
  • 出版年:2016
  • 出版时间:April 2016
  • 年:2016
  • 卷:35
  • 期:4
  • 页码:817-830
  • 全文大小:1,270 KB
  • 参考文献:Abdel-Ghany SE, Ye H, Garifullina GF, Zhang L, Pilon-Smits EA, Pilon M (2005) Iron-sulfur cluster biogenesis in chloroplasts. Involvement of the scaffold protein CpIscA. Plant Physiol 138:161–172CrossRef PubMed PubMedCentral
    Abeles FB, Morgan PW, Saltveit ME Jr (1992) Ethylene in plant biology, 2nd edn. Academic Press Inc, San Diego
    Adams DO, Yang SF (1979) Ethylene biosynthesis: identification of 1-aminocyclopropane-1-carboxylic acid as an intermediate in the conversion of methionine to ethylene. Proc Natl Acad Sci USA 76:170–174CrossRef PubMed PubMedCentral
    Alexander FW, Sandmeier E, Mehta PK, Christen P (1994) Evolutionary relationships among pyridoxal-5′-phosphate-dependent enzymes. Eur J Biochem 219:953–960CrossRef PubMed
    Alvarez C, Bermudez MA, Romero LC, Gotor C, Garcia I (2012) Cysteine homeostasis plays an essential role in plant immunity. New Phytol 193:165–177CrossRef PubMed
    Argueso CT, Hansen M, Kieber JJ (2007) Regulation of ethylene biosynthesis. J Plant Growth Regul 26:92–105CrossRef
    Balk J, Pilon M (2011) Ancient and essential: the assembly of iron-sulfur clusters in plants. Trends Plant Sci 16:218–226CrossRef PubMed
    Banks JA, Nishiyama T, Hasebe M, Bowman JL, Gribskov M, dePamphilis C, Albert VA, Aono N, Aoyama T, Ambrose BA, Ashton NW, Axtell MJ, Barker E, Barker MS, Bennetzen JL, Bonawitz ND, Chapple C, Cheng C, Correa LG, Dacre M, DeBarry J, Dreyer I, Elias M, Engstrom EM, Estelle M, Feng L, Finet C, Floyd SK, Frommer WB, Fujita T, Gramzow L, Gutensohn M, Harholt J, Hattori M, Heyl A, Hirai T, Hiwatashi Y, Ishikawa M, Iwata M, Karol KG, Koehler B, Kolukisaoglu U, Kubo M, Kurata T, Lalonde S, Li K, Li Y, Litt A, Lyons E, Manning G, Maruyama T, Michael TP, Mikami K, Miyazaki S, Morinaga S, Murata T, Mueller-Roeber B, Nelson DR, Obara M, Oguri Y, Olmstead RG, Onodera N, Petersen BL, Pils B, Prigge M, Rensing SA, Riano-Pachon DM, Roberts AW, Sato Y, Scheller HV, Schulz B, Schulz C, Shakirov EV, Shibagaki N, Shinohara N, Shippen DE, Sorensen I, Sotooka R, Sugimoto N, Sugita M, Sumikawa N, Tanurdzic M, Theissen G, Ulvskov P, Wakazuki S, Weng JK, Willats WW, Wipf D, Wolf PG, Yang L, Zimmer AD, Zhu Q, Mitros T, Hellsten U, Loque D, Otillar R, Salamov A, Schmutz J, Shapiro H, Lindquist E, Lucas S, Rokhsar D, Grigoriev IV (2011) The Selaginella genome identifies genetic changes associated with the evolution of vascular plants. Science 332:960–963CrossRef PubMed PubMedCentral
    Barnes JR, Lorenz WW, Dean JF (2008) Characterization of a 1-aminocyclopropane-1-carboxylate synthase gene from loblolly pine (Pinus taeda L.). Gene 413:18–31CrossRef PubMed
    Bennett RN, Wallsgrove RM (1994) Secondary metabolites in plant defence mechanisms. New Phytol 127:617–633CrossRef
    Bleecker AB (1999) Ethylene perception and signaling: an evolutionary perspective. Trends Plant Sci 4:269–274CrossRef PubMed
    Bleecker AB, Esterlle MA, Somerville C, Kende H (1988) Insensitivity to ethylene conferred by a dominant mutation in Arabidopsis thaliana. Science 241:1086–1089CrossRef PubMed
    Chernys J, Kende H (1996) Ethylene biosynthesis in Regnellidium diphyllum and Marsilea quadrifolia. Planta 200:113–118CrossRef
    Clough SJ, Bent AF (1998) Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J 16:735–743CrossRef PubMed
    Cookson C, Osborne DJ (1978) The stimulation of cell extension by ethylene and auxin in aquatic plants. Planta 144:39–47CrossRef PubMed
    Cove DJ, Perroud PF, Charron AJ, McDaniel SF, Khandelwal A, Quatrano RS (2009) The moss Physcomitrella patens: a novel model system for plant development and genomic studies. Cold Spring Harb protoc: pdb.emo115
    Czechowski T, Stitt M, Altmann T, Udvardi MK, Scheible WR (2005) Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis. Plant Physiol 139:5–17CrossRef PubMed PubMedCentral
    DeLong A, Booker MA (2015) Producing the ethylene signal: regulation and diversification of ethylene biosynthetic enzymes. Plant Physiol 169:42–50CrossRef PubMed
    Driessche TV, Kevers C, Collet M, Gaspar T (1988) Acetabularia mediterranea and ethylene: production in relation with development, circadian rhythms in emission, and response to external application. J Plant Physiol 133:635–639CrossRef
    Feng L, Geck MK, Eliot AC, Kirsch JF (2000) Aminotransferase activity and bioinformatic analysis of 1-aminocyclopropane-1-carboxylate synthase. Biochemistry 39:15242–15249CrossRef PubMed
    Gallie DR (2015) Appearance and elaboration of the ethylene receptor family during land plant evolution. Plant Mol Biol 87:521–539CrossRef PubMed
    García I, Gotor C, Romero LC (2015) Cysteine homeostasis. In: D’Mello JPF (ed) Amino acids in higher plants. CABI Publishing, Wallingford, pp 219–233
    Grubb CD, Abel S (2006) Glucosinolate metabolism and its control. Trends Plant Sci 11:89–100CrossRef PubMed
    Ishida K, Yamashino T, Nakanishi H, Mizuno T (2010) Classification of the genes involved in the two-component system of the moss Physcomitrella patens. Biosci Biotech Bioch 74:2542–2545CrossRef
    Jakubowicz M (2002) Structure, catalytic activity and evolutionary relationships of 1-aminocyclopropane-1-carboxylate synthase, the key enzyme of ethylene synthesis in higher plants. Acta Biochim Pol 49:757–774PubMed
    Jones PR, Manabe T, Awazuhara M, Saito K (2003) A new member of plant CS-lyases a cystine lyase from Arabidopsis thaliana. J Biol Chem 278:10291–10296CrossRef PubMed
    Ju C, Van de Poel B, Cooper ED, Thierer JH, Gibbons TR, Delwiche CF, Chang C (2015) Conservation of ethylene as a plant hormone over 450 million years of evolution. Nature Plants 1:1–7CrossRef
    Kawai Y, Ono E, Mizutani M (2014) Evolution and diversity of the 2-oxoglutarate-dependent dioxygenase superfamily in plants. Plant J 78:328–343CrossRef PubMed
    Kende H (1993) Ethylene biosynthesis. Annu Rev Plant Physiol Plant Mol Biol 44:283–307CrossRef
    Kiddle GA, Bennett RN, Hick AJ, Wallsgrove RM (1999) C-S lyase activities in leaves of crucifers and non-crucifers, and the characterization of three classes of C-S lyase activities from oilseed rape (Brassica napus L.). Plant, Cell Environ 22:433–445CrossRef
    Kwa SH, Wee YC, Kumar PP (1995) Role of ethylene in the production of sporophytes from Platycerium coronarium (Koenig) desv. frond and rhizome pieces cultured in vitro. J Plant Growth Regul 14:183–189CrossRef
    Lai D, Mao Y, Zhou H, Li F, Wu M, Zhang J, He Z, Cui W, Xie Y (2014) Endogenous hydrogen sulfide enhances salt tolerance by coupling the reestablishment of redox homeostasis and preventing salt-induced K (+) loss in seedlings of Medicago sativa. Plant Sci 225:117–129CrossRef PubMed
    Lancaster JE, Shaw ML, Joyce MDP, McCallum JA, McManus MT (2000) A novel alliinase from onion roots. Biochemical characterization and cDNA cloning. Plant Physiol 22:1269–1280CrossRef
    Leibrecht I, Kessler D (1997) A novel l -Cysteine/Cystine CS-lyase directing [2Fe-2S] cluster formation of synechocystis ferredoxin. J Biol Chem 272:10442–10447CrossRef PubMed
    Li N, Mattoo AK (1994) Deletion of the carboxyl-terminal region of 1-aminocyclopropane-1-carboxylic acid synthase, a key protein in the biosynthesis of ethylene, results in catalytically hyperactive, monomeric enzyme. J Biol Chem 269:6908–6917PubMed
    Lin X, Kaul S, Rounsley S, Shea TP, Benito MI, Town CD, Fujii CY, Mason T, Bowman CL, Barnstead M, Feldblyum TV, Buell CR, Ketchum KA, Lee J, Ronning CM, Koo HL, Moffat KS, Cronin LA, Shen M, Pai G, Aken SV, Umayam L, Tallon LJ, Gill JE, Adams MD, Carrera AJ, Creasy TH, Goodman HM, Somerville CR, Copenhaver GP, Preuss D, Nierman WC, White O, Eisen JA, Salzberg SL, Fraser CM, Venter JC (1999) Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Nature 402:761–768CrossRef PubMed
    Lin Z, Zhong S, Grierson D (2009) Recent advances in ethylene research. J Exp Bot 60:3311–3336CrossRef PubMed
    Liu D, Gong Q, Ma Y, Li P, Li J, Yang S, Yuan L, Yu Y, Pan D, Xu F, Wang NN (2010) cpSecA, a thylakoid protein translocase subunit, is essential for photosynthetic development in Arabidopsis. J Exp Bot 61:1655–1669CrossRef PubMed
    Liu YJ, Han XM, Ren LL, Yang HL, Zeng QY (2013) Functional divergence of the glutathione S-transferase supergene family in Physcomitrella patens reveals complex patterns of large gene family evolution in land plants. Plant Physiol 161:773–786CrossRef PubMed PubMedCentral
    Maillard P, Thepenier C, Gudin C (1993) Determination of an ethylene biosynthesis pathway in the unicellular green alga, Haematococcus pluvialis. Relationship between growth and ethylene production. J Appl Phycol 5:93–98CrossRef
    Mehta PK, Christen P (1994) Homology of 1-aminocyclopropane-1-carboxylate synthase, 8-amino-7-oxononanoate synthase, 2-amino-6-caprolactam racemase, 2,2-dialkylglycine decarboxylase, glutamate-1-semialdehyde 2,1-aminomutase and isopenicillin-N-epimerase with aminotransferases. Biochem Bioph Res Co 198:138–143CrossRef
    Mehta PK, Christen P (1998) The molecular evolution of pyridoxal-5′-phosphate-dependent enzymes. In: Purich DL (ed) Advances in enzymology and related areas of molecular biology: Mechanism of enzyme action. Wiley-Blackwell, Oxford, pp 129–184
    Mikkelsen MD, Naur P, Halkier BA (2004) Arabidopsis mutants in the C-S lyase of glucosinolate biosynthesis establish a critical role for indole-3-acetaldoxime in auxin homeostasis. Plant J 37:770–777CrossRef PubMed
    Mishler BD, Oliver MJ (2009) Putting Physcomitrella patens on the tree of life: the evolution and ecology of mosses. In: Knight CD, Perroud PF, Cove DJ (eds) The moss Physcomitrella patens. Wiley-Blackwell, Oxford, pp 1–15CrossRef
    Munt O, Prüfer D, Gronover CS (2013) A novel C-S lyase from the latex-producing plant Taraxacum brevicorniculatum displays alanine aminotransferase and l -cystine lyase activity. J Plant Physiol 170:33–40CrossRef PubMed
    Osborne DJ, Walters J, Milborrow BV, Norville A, Stange LM (1996) Evidence for a non-ACC ethylene biosynthesis pathway. Phytochemistry 42:51–60CrossRef
    Plettner INA, Steinke M, Malin G (2005) Ethene (ethylene) production in the marine macroalga Ulva (Enteromorpha) intestinalis L. (Chlorophyta, Ulvophyceae) effect of light-stress and co-production with dimethyl sulphide. Plant, Cell Environ 28:1136–1145CrossRef
    Ralph SG, Hudgins JW, Jancsik S, Franceschi VR, Bohlmann J (2007) Aminocyclopropane carboxylic acid synthase is a regulated step in ethylene-dependent induced conifer defense. Full-length cDNA cloning of a multigene family, differential constitutive, and wound- and insect-induced expression, and cellular and subcellular localization in spruce and Douglas fir. Plant Physiol 143:410–424CrossRef PubMed PubMedCentral
    Ramirez EC, Whitaker JR (1998) Cystine lyases in plants: a comprehensive review. J Food Biochem 22:427–440CrossRef
    Rensing SA, Lang D, Zimmer AD, Terry A, Salamov A, Shapiro H, Nishiyama T, Perroud PF, Lindquist EA, Kamisugi Y, Tanahashi T, Sakakibara K, Fujita T, Oishi K, Shin-I T, Kuroki Y, Toyoda A, Suzuki Y, Hashimoto S, Yamaguchi K, Sugano S, Kohara Y, Fujiyama A, Anterola A, Aoki S, Ashton N, Barbazuk WB, Barker E, Bennetzen JL, Blankenship R, Cho SH, Dutcher SK, Estelle M, Fawcett JA, Gundlach H, Hanada K, Heyl A, Hicks KA, Hughes J, Lohr M, Mayer K, Melkozernov A, Murata T, Nelson DR, Pils B, Prigge M, Reiss B, Renner T, Rombauts S, Rushton PJ, Sanderfoot A, Schween G, Shiu SH, Stueber K, Theodoulou FL, Tu H, Van de Peer Y, Verrier PJ, Waters E, Wood A, Yang L, Cove D, Cuming AC, Hasebe M, Lucas S, Mishler BD, Reski R, Grigoriev IV, Quatrano RS, Boore JL (2008) The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science 319:64–69CrossRef PubMed
    Reski R (1998) Development, genetics and molecular biology of mosses. Botanica Acta 111:1–15CrossRef
    Rohwer F, Bopp M (1985) Ethylene synthesis in moss protonema. J Plant Physiol 117:331–338CrossRef PubMed
    Rorick MM, Wagner GP (2009) The origin of conserved protein domains and amino acid repeats via adaptive competition for control over amino acid residues. J Mol Evol 70:29–43CrossRef PubMed PubMedCentral
    Rose P, Whiteman M, Moore PK, Zhu YZ (2005) Bioactive S-alk(en)yl cysteine sulfoxide metabolites in the genus Allium: the chemistry of potential therapeutic agents. Nat Prod Rep 22:351–368CrossRef PubMed
    Ross JJ, Reid JB (2010) Evolution of growth-promoting plant hormones. Funct Plant Biol 37:795–805CrossRef
    Seo M, Akaba S, Oritani T, Delarue M, Bellini C, Caboche M, Koshiba T (1998) Higher activity of an aldehyde oxidase in the auxin-overproducing superroot1 mutant of Arabidopsis thaliana. Plant Physiol 116:687–693CrossRef PubMed PubMedCentral
    Sleator RD (2014) Proteins. Bioengineered 3:80–85CrossRef
    Stange LMC, Osborne DJ (1989) Contrary effects of ethylene and ACC on cell growth in the liverwort Riella Helicophylla. In: Clijsters H, De Proft M, Marcelle R, Van Poucke M (eds) Biochemical and physiological aspects of ethylene production in lower and higher plants. Springer, Berlin, pp 341–348CrossRef
    Timme RE, Delwiche CF (2010) Uncovering the evolutionary origin of plant molecular processes: comparison of Coleochaete (Coleochaetales) and Spirogyra (Zygnematales) transcriptomes. BMC Plant Biol 10:96CrossRef PubMed PubMedCentral
    Tittle FL (1987) Auxin-stimulated ethylene production in fern gametophytes and sporophytes. Physiol Plant 70:499–502CrossRef
    Tsuchisaka A, Yu G, Jin H, Alonso JM, Ecker JR, Zhang X, Gao S, Theologis A (2009) A combinatorial interplay among the 1-aminocyclopropane-1-carboxylate isoforms regulates ethylene biosynthesis in Arabidopsis thaliana. Genetics 183:979–1003CrossRef PubMed PubMedCentral
    Udvardi MK, Czechowski T, Scheible WR (2008) Eleven golden rules of quantitative RT-PCR. Plant Cell 20:1736–1737CrossRef PubMed PubMedCentral
    Wang KL, Li H, Ecker JR (2002) Ethylene biosynthesis and signaling networks. Plant Cell 14(Suppl):131–151
    Wang W, Esch JJ, Shiu SH, Agula H, Binder BM, Chang C, Patterson SE, Bleecker AB (2006) Identification of important regions for ethylene binding and signaling in the transmembrane domain of the ETR1 ethylene receptor of Arabidopsis. Plant Cell 18:3429–3442CrossRef PubMed PubMedCentral
    Wang C, Liu Y, Li SS, Han GZ (2015) Insights into the origin and evolution of the plant hormone signaling machinery. Plant Physiol 167:872–886CrossRef PubMed PubMedCentral
    Ward DE, de Vos WM, van der Oost J (2002) Molecular analysis of the role of two aromatic aminotransferases and a broad-specificity aspartate aminotransferase in the aromatic amino acid metabolism of Pyrococcus furiosus. Archaea 1:133–141CrossRef PubMed PubMedCentral
    Yasumura Y, Pierik R, Fricker MD, Voesenek LA, Harberd NP (2012) Studies of Physcomitrella patens reveal that ethylene-mediated submergence responses arose relatively early in land-plant evolution. Plant J 72:947–959CrossRef PubMed
    Yoshida Y, Nakano Y, Amano A, Yoshimura M, Fukamachi H, Oho T, Koga T (2002) lcd from Streptococcus anginosus encodes a C-S lyase with α, β-elimination activity that degrades L-cysteine. Microbiology 148:3961–3970CrossRef PubMed
    Yu LX, Zhang CJ, Shang HQ, Wang XF, Wei M, Yang FJ, Shi QH (2013) Exogenous hydrogen sulfide enhanced antioxidant capacity, amylase activities and salt tolerance of cucumber hypocotyls and radicles. J Integr Agr 12:445–456CrossRef
    Zhang H, Hu LY, Hu KD, He YD, Wang SH, Luo JP (2008) Hydrogen sulfide promotes wheat seed germination and alleviates oxidative damage against copper stress. J Integr Plant Biol 50:1518–1529CrossRef PubMed
    Zhang H, Tan ZQ, Hu LY, Wang SH, Luo JP, Jones RL (2010) Hydrogen sulfide alleviates aluminum toxicity in germinating wheat seedlings. J Integr Plant Biol 52:556–567CrossRef PubMed
    Zhang TC, Qiao Q, Zhong Y (2012) Detecting adaptive evolution and functional divergence in aminocyclopropane-1-carboxylate synthase (ACS) gene family. Comput Biol Chem 38:10–16CrossRef PubMed
  • 作者单位:Lifang Sun (1)
    Hui Dong (1)
    Nasrullah (1)
    Yuanyuan Mei (1)
    Ning Ning Wang (1)

    1. Department of Plant Biology and Ecology, College of Life Sciences, Nankai University, Tianjin, 300071, China
  • 刊物类别:Biomedical and Life Sciences
  • 刊物主题:Life Sciences
    Cell Biology
    Plant Sciences
    Biotechnology
    Plant Biochemistry
  • 出版者:Springer Berlin / Heidelberg
  • ISSN:1432-203X
文摘
Key message Two ACC synthase-like (ACL) proteins in the moss Physcomitrella patens have no ACS activity, and PpACL1 functions as an l -cystine/ l -cysteine C-S lyase.

© 2004-2018 中国地质图书馆版权所有 京ICP备05064691号 京公网安备11010802017129号

地址:北京市海淀区学院路29号 邮编:100083

电话:办公室:(+86 10)66554848;文献借阅、咨询服务、科技查新:66554700