High-resolution identification and abundance profiling of cassava (Manihot esculenta Crantz) microRNAs

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• 作者：Behnam Khatabi ; Siwaret Arikit ; Rui Xia ; Stephan Winter ; Doungous Oumar…
• 关键词：Cassava ; miRNAs ; Deep sequencing ; phasiRNAs ; PHAS loci ; qRT ; PCR
• 刊名：BMC Genomics
• 出版年：2016
• 出版时间：December 2016
• 年：2016
• 卷：17
• 期：1
• 全文大小：1,397 KB
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• 作者单位：Behnam Khatabi (1)
  Siwaret Arikit (2) (6)
  Rui Xia (2)
  Stephan Winter (3)
  Doungous Oumar (1) (4)
  Kone Mongomake (1) (5)
  Blake C. Meyers (2)
  Vincent N. Fondong (1)
  
  1. Department of Biological Sciences, Delaware State University, Dover, DE, 19901, USA
  2. Delaware Biotechnology Institute, University of Delaware, Newark, DE, 19711, USA
  6. Department of Agronomy, Faculty of Agriculture at Kamphaeng Saen and Rice Science Center, Kasetsart University, Kamphaeng Saen, Nakhon Pathom, 73140, Thailand
  3. Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany
  4. Ekona Research Centre, Southwest, Cameroon
  5. Université Nangui Abrogoua, Abidjan, Côte d’Ivoire
  
• 刊物主题：Life Sciences, general; Microarrays; Proteomics; Animal Genetics and Genomics; Microbial Genetics and Genomics; Plant Genetics & Genomics;
• 出版者：BioMed Central
• ISSN：1471-2164

文摘

Background Small RNAs (sRNAs) are endogenous sRNAs that play regulatory roles in plant growth, development, and biotic and abiotic stress responses. In plants, one subset of sRNAs, microRNAs (miRNAs) exhibit tissue-differential expression and regulate gene expression mainly through direct cleavage of mRNA or indirectly via production of secondary phased siRNAs (phasiRNAs) that silence cognate target transcripts in trans.