Genetic structure of a vulnerable species, the freshwater blenny (Salaria fluviatilis)
详细信息    查看全文
  • 作者:Martin Laporte ; Raphael Leblois ; Aurélie Coulon ; Fran?ois Bonhomme…
  • 关键词:Evolutionarily significant unit ; Allele size permutation test ; Freshwater fish conservation ; Glacial refuge ; Endemic species ; Blenniidae
  • 刊名:Conservation Genetics
  • 出版年:2015
  • 出版时间:June 2015
  • 年:2015
  • 卷:16
  • 期:3
  • 页码:571-581
  • 全文大小:1,933 KB
  • 参考文献:Almada VC, Robalo JI, Levy A, Freyhof J, Bernardi G, Doadrio I (2009) Phylogenetic analysis of peri-Mediterranean blennies of the genus Salaria: molecular insights on the colonization of freshwaters. Mol Phylogenet Evol 52(2):424-31View Article PubMed
    Aparicio E, Vargas MJ, Olmo JM, De Sostoa A (2000) Decline of native freshwater fishes in a Mediterranean watershed on the Iberian Peninsula: a quantitative assessment. Environ Biol Fish 59:11-9View Article
    Balik S (1995) Freshwater fish in Anatolia, Turkey. Biol Conserv 72:213-23View Article
    Bianco PG (1995) Mediterranean endemic fresh-water fishes of Italy. Biol Conserv 72:159-70View Article
    Bizon JJ, Burollet PF (1984) écologie des microorganismes en Méditerranée occidentale. Association fran?aise des techniciens du pétrole, Paris
    Briggs JC (2010) A plethora of blennies. Environ Biol Fish 87:89-2View Article
    Carlsson J (2008) Effects of microsatellite null alleles on assignment testing. J Hered 99:616-23View Article PubMed
    Changeux T, Pont D (1995) Current status of the riverine fishes of the French Mediterranean basin. Biol Conserv 72:137-58View Article
    Collares-Pereira MJ, Cowx IG, Ribeiro F, Rodrigues JA, Rogado L (2000) Threats imposed by water resource development schemes on the conservation of endangered fish species in the Guadiana River Basin in Portugal. Fish Manag Ecol 7:167-78View Article
    C?té IM, Vinyoles D, Reynolds DJ, Doadrio I, Perdices A (1999) Potential impacts of gravel extraction on Spanish populations of river blennies Salaria fluviatilis (Pisces, Blenniidae). Biol Conserv 87:359-67View Article
    Doadrio I (2001) Atlas y libro rojo de los peces continentals de Espa?a. Dirección General de Conservación de la Naturaleza. Museo Nacional de Ciencias Naturales, Madrid
    Duchesne P, Turgeon J (2009) FLOCK: a method for quick mapping of admixture without source samples. Mol Ecol Res 9:1333-344View Article
    Duchesne P, Turgeon J (2012) FLOCK provides reliable solutions to the “number of populations-problem. J Hered 103:734-43View Article PubMed
    Dudgeon D, Arthington AH, Gessner MO, Kawabata ZI, Knowler DJ, Leveque C, Naiman RJ, Prieur-Richard AH, Soto D, Stiassny MLJ, Sullivan CA (2006) Freshwater biodiversity: importance, threats, status and conservation challenges. Biol Rev 81:163-82View Article PubMed
    Earl DA, von Holdt BM (2012) STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method. Conserv Genet Res 4(2):359-61View Article
    Elvira B (1995a) Conservation status of endemic freshwater fish in Spain. Biol Conserv 72:129-36View Article
    Elvira B (1995b) Native and exotic freshwater fishes in Spanish river basins. Freshw Biol 33:103-08View Article
    Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol Ecol 14:2611-620View Article PubMed
    Excoffier L, Laval G, Schneider S (2005) Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evol Bioinform 1:47-0
    Falush D, Stephens M, Pritchard JK (2003) Inference of population structure: extensions to linked loci and correlated allele frequencies. Genetics 164:1567-587PubMed Central PubMed
    Ferrito V, Tigano C (1996) Decline of Aphanius fasciatus (Cyprinodontidae) and Salaria fluviatilis (Blenniidae) populations in freshwater of eastern Sicily. Ichth Expl Fresh 7:181-84
    Fraser DJ, Bernatchez L (2001) Adaptive evolutionary conservation: towards a unified concept for defining conservation units. Mol Ecol 10:2741-752View Article PubMed
    Freeman MC, Vi?olas D, Grossman GD, De Sostoa A (1990) Microhabitat use by Blennius fluviatilis in the Rio Matarra?a, Spain. Freshw Biol 24:335-46View Article
    Freyhof J, Brooks E (2011) European red list of freshwater fishes. Publications Office of the European Union, Luxemburg
    Froese R, Pauly D (2013) FishBase. World Wide Web electronic publication. www.?fishbase.?org , version (10/2013)
    Gautier A, Berrebi P (2007) La colonisation de l’?le par différentes souches de truite. In: Guide de gestion de la truite macrostigma. Fédération de la Corse pour la pêche et la protection des milieux aquatiques (FCPPMA) and associates, France
    Gil F, Faria C, Almada VC (2010) An efficient technique for the captive breeding of an endangered freshwater fish Salaria fluviatilis (Pisces: Blenniidae), with a description of its ontogeny. J World Aquacult Soc 41:49-6View Article
    Girard P, Angers B (2008) Assessment of power and accuracy of methods for detection and frequency-estimation of null alleles. Genetica 134:187-97View Article PubMed
    Glaubitz JC (2004) CONVERT: a user-friendly program to reformat diploid genotypic data for commonly used population genetic software packages. Mol Ecol Notes 4:309-10View Article
    Goudet J (1995) FSTAT (Version 1.2): a computer program to calculate F-statistics. J Her
  • 作者单位:Martin Laporte (1) (6)
    Raphael Leblois (2)
    Aurélie Coulon (3) (4)
    Fran?ois Bonhomme (1)
    Pierre Magnan (5)
    Patrick Berrebi (1)

    1. Institut des Sciences de l’Evolution de Montpellier (ISEM), UMR 5554 UM2-CNRS-IRD, Université Montpellier II, CC065, Place E. Bataillon, 34095, Montpellier, Cedex 5, France
    6. Département de biologie, Institut de Biologie Intégrative et des Systèmes (IBIS), Université Laval, Québec, QC, G1V 0A6, Canada
    2. INRA-UMR1062 CBGP, Centre de Biologie pour la Gestion des populations, 34988, Montferrier-sur-Lez, France
    3. Muséum National d’Histoire Naturelle (MNHN), UMR 7204, 4 avenue du Petit Chateau, 91800, Brunoy, France
    4. Centre d’Ecologie Fonctionnelle et Evolutive (CEFE), UMR 5175, 1919 route de Mende, 34293, Montpellier 5, France
    5. Centre de recherche sur les interactions bassins versants—écosystèmes aquatiques (RIVE), Université du Québec à Trois-Rivières, C.P. 500, Trois-Rivières, QC, G9A 5H7, Canada
  • 刊物类别:Biomedical and Life Sciences
  • 刊物主题:Biomedicine
    Human Genetics
    Animal Anatomy, Morphology and Histology
    Plant Sciences
    Evolutionary Biology
  • 出版者:Springer Netherlands
  • ISSN:1572-9737
文摘
The freshwater blenny (Salaria fluviatilis), an endemic fish to the tributaries of the Mediterranean and Black seas, is considered endangered in five of the nine Mediterranean-European countries. Substantial effort has recently been made to improve our understanding of its biology (i.e., habitat modelling, morphology, behaviour), but developing a conservation program for a species is less effective without a thorough knowledge of its genetic heterogeneity. The goal of this study was to assess the existence and boundaries of freshwater blenny genetic clusters in the occidental basin of the Mediterranean Sea. Our results suggest a genetic structure at two levels. The first is a range-wide product of two different glacial refuges, potentially the Iberian Peninsula (South of Spain; the origin of the “western-group) and Corsica (the “eastern-group). Subsequent northward migration likely took place along the Mediterranean coasts from these two glacial refuges to the southern part of mainland France, where a second contact zone potentially occurred. The second level is a fine-scale genetic structure corresponding to eight genetic groups—four to the west from the “western-refuge and four to the east from the “eastern-refuge. Furthermore, we demonstrate that population differentiation between the western and eastern groups had occurred far enough in the past that new mutations and not solely drift effects were detectable. These results provide a foundation on which to design future conservation efforts of the freshwater blenny in the occidental basin of the Mediterranean Sea.

© 2004-2018 中国地质图书馆版权所有 京ICP备05064691号 京公网安备11010802017129号

地址:北京市海淀区学院路29号 邮编:100083

电话:办公室:(+86 10)66554848;文献借阅、咨询服务、科技查新:66554700