Phage Eco-Locator: a web tool for visualization and analysis of phage genomes in metagenomic data sets
详细信息 查看全文
- 作者：Ramy K Aziz (1) (2)
Bhakti Dwivedi (3)
Mya Breitbart (3)
Robert A Edwards (1) (4) - 刊名：BMC Bioinformatics
- 出版年：2011
- 出版时间：December 2011
- 年：2011
- 卷：12
- 期：7-supp
- 全文大小：235KB
- 参考文献：1. Bergh O, B酶rsheim KY, Bratbak G, Heldal M: High abundance of viruses found in aquatic environments. / Nature 1989, 340:467鈥?68. CrossRef
2. Jiang SC, Paul JH: Gene transfer by transduction in the marine environment. / Appl Environ Microbiol 1998, 64:2780鈥?787.
3. Handelsman J: Metagenomics: application of genomics to uncultured microorganisms. / Microbiol Mol Biol Rev 2004, 68:669鈥?85. CrossRef
4. Casas V, Rohwer F: Phage metagenomics. / Methods Enzymol 2007, 421:259鈥?68. CrossRef
5. Schoenfeld T, Liles M, Wommack KE, Polson SW, Godiska R, Mead D: Functional viral metagenomics and the next generation of molecular tools. / Trends Microbiol 2010, 18:20鈥?9. CrossRef
6. Edwards RA, Rohwer F: Viral metagenomics. / Nat Rev Microbiol 2005, 3:504鈥?10. CrossRef
7. Breitbart M, Rohwer F: Here a virus, there a virus, everywhere the same virus? / Trends Microbiol 2005, 13:278鈥?84. CrossRef
8. Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ: Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. / Nucleic Acids Res 1997, 25:3389鈥?402. CrossRef - 作者单位：Ramy K Aziz (1) (2)
Bhakti Dwivedi (3)
Mya Breitbart (3)
Robert A Edwards (1) (4)
1. Department of Computer Science, San Diego State University, San Diego, CA, 92182, USA
2. Department of Microbiology and Immunology, Faculty of Pharmacy, Cairo University, Cairo, Egypt
3. College of Marine Science, University of South Florida, St. Petersburg, FL, USA
4. Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, IL, USA - ISSN：1471-2105
文摘