Multi-modal Surface-Based Alignment of Cortical Areas Using Intra-cortical T1 Contrast
详细信息    查看全文
  • 作者:Christine Lucas Tardif (22)
    Juliane Dinse (22) (23)
    Andreas Sch?fer (22)
    Robert Turner (22)
    Pierre-Louis Bazin (22)
  • 关键词:neuroimaging analysis ; multi ; modal ; multi ; contrast ; surface registration ; cortical areas ; cortical folding ; cortical curvature ; cortical morphometry ; myelin ; quantitative T1 ; brain mapping ; group analysis
  • 刊名:Lecture Notes in Computer Science
  • 出版年:2013
  • 出版时间:2013
  • 年:2013
  • 卷:8159
  • 期:1
  • 页码:233-245
  • 全文大小:1482KB
  • 参考文献:1. Brodmann, K.: Vergleichende Lokalisationslehre der Grosshirnrinde. Barth, Leipzig (1909)
    2. Fischl, B., Rajendran, N., Busa, E., Augustinack, J., Hinds, O., Yeo, B.T., Mohlberg, H., Amunts, K., Zilles, K.: Cortical Folding Patterns and Predicting Cytoarchitecture. Cereb. Cortex?18, 1973-980 (2008) CrossRef
    3. Frost, M.A., Goebel, R.: Measuring Structural-Functional Correspondence: Spatial Variability of Specialised Brain Regions after Macro-anatomical Alignment. NeuroImage?59, 1369-381 (2012) CrossRef
    4. van Atteveldt, N., Formisano, E., Goebel, R., Blomert, L.: Integration of Letters and Speech Sounds in the Human Brain. Neuron?43, 271-82 (2004) CrossRef
    5. Van Essen, D.C.: A Population-Average, Landmark- and Surface-Based (PALS) Atlas of Human Cerebral Cortex. NeuroImage?28, 635-62 (2005) CrossRef
    6. Joshi, A.A., Shattuck, D.W., Thompson, P.M., Leahy, R.M.: Surface-Constrained Volumetric Brain Registration using Harmonic Mappings. IEEE Trans. Med. Imag.?26, 1657-669 (2007) CrossRef
    7. Fischl, B., Sereno, M.I., Dale, A.M.: Cortical Surface-Based Analysis II: Inflation, Flattening, and a Surface-Base Coordinate System. NeuroImage?9, 195-07 (1999) CrossRef
    8. Tosun, D., Rettmann, M.E., Han, X., Tao, X., Xu, C., Resnick, S.M., Pham, D.L., Prince, J.L.: Cortical Surface Segmentation and Mapping. NeuroImage?23, S108–S118 (2004)
    9. Goebel, R., Esposito, F., Formisano, E.: Analysis of Functional Image Analysis Contest (FIAC) Data with Brainvoyager QX: From Single-Subject to Cortically Aligned Group General Linear Model Analysis and Self-Organizing Group Independent Component Analysis. Hum. Brain. Map.?27, 392-01 (2006) CrossRef
    10. Yeo, B.T.T., Sabuncu, M.R., Vercauteren, T., Ayache, N., Fischl, B., Golland, P.: Spherical Demons: Fast Diffeomorphic Landmark-Free Surface Registration. IEEE Trans. Med. Imag.?29, 650-68 (2010) CrossRef
    11. Park, H., Park, J.-S., Seong, J.-K., Na, D.L., Lee, J.-M.: Cortical Surface Registration using Spherical Thin-Plate Spline with Sulcal Lines and Mean Curvature as Features. J. Neurosci. Methods?206, 46-3 (2012) CrossRef
    12. Pantazis, D., Joshi, A., Jiang, J., Shattuck, D.W., Bernstein, L.E., Damasio, H., Leahy, R.M.: Comparison of Landmark-Based and Automatic Methods for Cortical Surface Registration. NeuroImage?49, 2479-493 (2010) CrossRef
    13. Geyer, S., Weiss, M., Reimann, K., Lohmann, G., Turner, R.: Microstructural Par- cellation of the Human Cerebral Cortex - From Brodmann’s Post-Mortem Map to In Vivo Mapping with High-Field Magnetic Resonance Imaging. Front. Human Neurosci.?5, 1-9 (2011)
    14. Sereno, M.I., Lutti, A., Weiskopf, N., Dick, F.: Mapping the Human Cortical Surface by Combining Quantitative T1 with Retinotopy. Cereb. Cortex (2012) (in press)
    15. Cohen-Adad, J., Polimeni, J.R., Helmer, K.G., Benner, T., McNab, J.A., Wald, L.L., Rosen, B.R., Mainero, C.: T2* Mapping and B0 Orientation-Dependence at 7 T Reveal Cyto- and Myeloarchitecture Organization of the Human Cortex. NeuroImage?60, 1006-014 (2012) CrossRef
    16. Glasser, M.F., Van Essen, D.C.: Mapping Human Cortical Areas In Vivo Based on Myelin Content as Revealed by T1- and T2-weighted MRI. J. Neurosci.?31, 11597-1616 (2011) CrossRef
    17. Avants, B.B., Epstein, C.L., Grossman, M., Gee, J.C.: Symmetric Diffeomorphic Image Registration with Cross-correlation: Evaluating Automated Labeling of Elderly and Neurodegenerative Brain. Med. Imag. Anal.?12, 26-1 (2008) CrossRef
    18. Klein, A., Andersson, J., Ardekani, B.A., Ashburner, J., Avants, B., Chiang, M.-C., Christensen, G.E., Collins, D.L., Gee, J., Hellier, P., Song, J.H., Jenkinson, M., Lepage, C., Rueckert, D., Thompson, P., Vercauteren, T., Woods, R.P., Mann, J.J., Parsey, R.V.: Evaluation of 14 Monlinear Deformation Algorithms applied to Human Brain MRI Registration. NeuroImage?46, 786-02 (2009) CrossRef
    19. Marques, J.P., Kober, T., Krueger, G., van der Zwaag, W., Van de Moortele, P.F., Gruetter, R.: MP2RAGE, a Self Bias-Field Corrected Sequence for Improved Segmentation and T1-Mapping at High Field. NeuroImage?49, 1271-281 (2010) CrossRef
    20. Teeuwisse, W.M., Brink, W.M., Webb, A.G.: Quantitative Assessment of the Effects of High-Permittivity Pads in 7 Tesla MRI of the Brain. Magn. Reson. Med.?67, 1285-293 (2012) CrossRef
    21. Bazin, P.-L., Weiss, M., Dinse, J., Sch?fer, A., Trampel, R., Turner, R.: A Computational Framework for Ultra-high Resolution Cortical Segmentation at 7 Tesla. NeuroImage (in press, 2013)
    22. Han, X., Pham, D.L., Tosun, D., Rettmann, M.E., Xu, C., Prince, J.L.: CRUISE: Cortical Reconstruction using Implicit Surface Evolution. NeuroImage?23, 997-012 (2004) CrossRef
    23. Waehnert, M.D., Dinse, J., Weiss, M., Streicher, M.N., Waehnert, P., Geyer, S., Turner, R., Bazin, P.-L.: Anatomically Motivated Modeling of Cortical Laminae. NeuroImage (in press, 2013)
    24. Koenderink, J.J., van Doorn, A.J.: Surface Shape and Curvature Scales. Imag. Vision Comp.?10, 557-64 (1992) CrossRef
    25. Vemuri, B.C., Ye, J., Chen, Y., Leonard, C.M.: Image Registration via Level-Set Motion: Applications to Atlas-Based Segmentation. Med. Imag. Anal.?7, 1-0 (2003) CrossRef
    26. Van Essen, D.C., Glasser, M.F.: In Vivo Architectonics: A Cortical-Centric Perspective. NeuroImage (in press, 2013)
    27. Van Essen, D.C., Ugurbil, K., Auerbach, E., Barch, D., Behrens, T.E.J., Bucholz, R., Chang, A., Chen, L., Corbetta, M., Curtiss, S.W., Della Penna, S., Feinberg, D., Glasser, M.F., Harel, N., Heath, A.C., Larson-Prior, L., Marcus, D., Michalareas, G., Moeller, S., Oostenveld, R., Petersen, S.E., Prior, F., Schlaggar, B.L., Smith, S.M., Snyder, A.Z., Xu, J., Yacoub, E.: The Human Connectome Project: A Data Acquisition Perspective. NeuroImage?62, 2222-231 (2012) CrossRef
  • 作者单位:Christine Lucas Tardif (22)
    Juliane Dinse (22) (23)
    Andreas Sch?fer (22)
    Robert Turner (22)
    Pierre-Louis Bazin (22)

    22. Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
    23. Faculty of Computer Science, Otto-von-Guericke University, Magdeburg, Germany
文摘
The position of cortical areas in the brain is related to cortical folding patterns; however, intersubject variability remains, particularly for higher cortical areas. Current cortical surface registration techniques align cortical folding patterns using sulcal landmarks or cortical curvature, for instance. The alignment of cortical areas by these techniques is thus inherently limited by the sole use of geometric similarity metrics. Magnetic resonance imaging T1 maps show intra-cortical contrast that reflects myelin content, and thus can be used, in addition to cortical geometry, to improve the alignment of cortical areas. In this article, we present a new symmetric diffeomorphic multi-modal surface-based registration technique that works in the level-set framework. We demonstrate that the alignment of cortical areas is improved by using T1 maps. Finally, we present a unique group-average ultra-high resolution T1 map at multiple cortical depths, highlighting the registration accuracy achieved. The method can easily be extended to include other MR contrasts, such as functional data and anatomical connectivity, as well as other neuroimaging modalities.

© 2004-2018 中国地质图书馆版权所有 京ICP备05064691号 京公网安备11010802017129号

地址:北京市海淀区学院路29号 邮编:100083

电话:办公室:(+86 10)66554848;文献借阅、咨询服务、科技查新:66554700