The vicious cycle of lettuce corky root disease: effects of farming system, nitrogen fertilizer and herbicide
详细信息    查看全文
  • 作者:Ariena H. C. van Bruggen (1) (2) (3)
    Isolde M. Francis (1)
    Randy Krag (2) (4)

    1. Department of Plant Pathology
    ; University of Florida ; Gainesville ; FL ; 32611 ; USA
    2. Department of Plant Pathology
    ; University of California ; Davis ; CA ; 95616 ; USA
    3. Emerging Pathogens Institute
    ; University of Florida ; Gainesville ; FL ; 32611 ; USA
    4. Beckstoffer Vineyards
    ; Red Hills ; Kelseyville ; CA ; 95451 ; USA
  • 关键词:Soil health ; Nitrogen fertilizer ; Pronamide herbicide ; Microbial activity ; Organic and conventional agriculture ; Rhizorhapis suberifaciens
  • 刊名:Plant and Soil
  • 出版年:2015
  • 出版时间:March 2015
  • 年:2015
  • 卷:388
  • 期:1-2
  • 页码:119-132
  • 全文大小:411 KB
  • 参考文献:1. Al-Khatib, K (1996) Tulip (Tulipa spp.) daffodil (Narcissus spp.) and iris (Iris spp.) response to preemergence herbicides. Weed Technol 10: pp. 710-715
    2. Alvarez, J, Datnoff, LE, Nagata, RT (1992) Crop rotation minimizes losses from corky root in Florida lettuce. HortSci 27: pp. 66-68
    3. Anonymous (1986) Crop Protection Chemicals Reference, 2nd edn. Chem and Pharmac Press, J Wiley and Sons, and Chem Pharmac Publ Corp: New York
    4. Bottoms, TG, Smith, RF, Cahn, MD, Hartz, TK (2012) Nitrogen requirements and N status determination of lettuce. HortSci 47: pp. 1768-1774
    5. Brown, PR, Michelmore, RW (1988) The genetics of corky root resistance in lettuce. Phytopathology 78: pp. 1145-1150 CrossRef
    6. Clark, MS, Ferris, H, Klonsky, K, Lanini, WT, Bruggen, AHC, Zalom, FG (1998) Agronomic, economic, and environmental comparison of pest management in conventional and alternative tomato and corn systems in Northern California. Agric Ecosyst Environ 68: pp. 51-71 30-8" target="_blank" title="It opens in new window">CrossRef
    7. Daamen, RA, Wijnands, FG, Vliet, G (1989) Epidemics of diseases and pests of winter wheat at different levels of agrochemical input. A study on the possibilities for designing an integrated cropping system. J Phytopathol 125: pp. 305-319 39-0434.1989.tb01075.x" target="_blank" title="It opens in new window">CrossRef
    8. Drinkwater, LE, Workneh, F, Letourneau, DK, Bruggen, AHC, Shennan, C (1995) Fundamental differences between conventional and organic tomato agroecosystems in California. Ecol Applic 5: pp. 1098-1112 307/2269357" target="_blank" title="It opens in new window">CrossRef
    9. Francis, IM, Jochimsen, KN, Vos, P, Bruggen, AHC (2014) Reclassification of rhizosphere bacteria including strains causing corky root of lettuce as Rhizorhapis suberifaciens gen. nov., Sphingobium mellinum sp. nov., Sphingobium xanthum sp. nov., Sphingopyxis sp., and Rhizorhabdus argenteus gen. nov., sp. nov. Int J Syst Evol Microbiol 64: pp. 1340-1350 CrossRef
    10. Gattinger, A, Mueller, A, Haeni, M, Skinner, C, Fliessbach, A, Buchmann, N, M盲der, P, Stolze, M, Smith, P, El-Hage Scialabba, N, Niggli, U (2012) Enhanced top soil carbon stocks under organic farming. Proc Natl Acad Sci 109: pp. 18226-18231 3/pnas.1209429109" target="_blank" title="It opens in new window">CrossRef
    11. Geisseler D, Horwath WR (2013) Lettuce Production in California. Fertilizer Research and Education Program. http://apps.cdfa.ca.gov/frep/docs/Lettuce_Production_CA.pdf. Accessed 1 May 2014
    12. Haas, G, Berg, M, Koepke, U Nitrate leaching: comparing conventional, integrated and organic agricultural production systems. In: Steenvorden, J, Claessen, F, Willems, J eds. (2002) Agricultural effects on ground and surface waters. Intern Association of Hydrological Sciences, IAHS Publ 273, Oxfordshire, pp. 131-136
    13. Hager AG, Nordby D (2007) Herbicide persistence and how to test for residues in soils. Illinois Agricultural Pest Management Handbook. IPM program, University of Illinois Extension, Urabana-Champaign, Illinois. http://ipm.illinois.edu/pubs/iapmh/15chapter.pdf. Accessed 1 May 2014
    14. Harter T, Lund JR (2012) Addressing Nitrate in California鈥檚 Drinking Water with a Focus on Tulare Lake Basin and Salinas Valley Groundwater. Report for the State Water Resources Control Board Report to the Legislature. Center for Watershed Sciences, University of California, Davis, p 78
    15. He, M, Ma, W, Tian, G, Blok, W, Khodzaeva, A, Zelenev, VV, Semenov, AM, Bruggen, AHC (2010) Daily changes of infections by Pythium ultimum after a nutrient impulse in organic versus conventional soils. Phytopathology 100: pp. 593-600 3" target="_blank" title="It opens in new window">CrossRef
    16. Hiddink, GA, Bruggen, AHC, Termorshuizen, AJ, Raaijmakers, JM, Semenov, AV (2005) Effect of organic management of soils on suppressiveness to Gaeumannomyces graminis var. tritici and its antagonist, Pseudomonas fluorescens. Eur J Plant Pathol 113: pp. 417-435 CrossRef
    17. Jackson, LE, Ramirez, IR, Yokota, R, Fennimore, SA, Koike, ST, Henderson, DM, Chaney, WE, Klonsky, KM (2003) Scientists, growers assess trade-offs in use of tillage, cover crops and compost. Calif Agric 57: pp. 48-54 3733/ca.v057n02p48" target="_blank" title="It opens in new window">CrossRef
    18. Jackson, LE, Ramirez, I, Yokota, R, Fennimore, SA, Koike, ST, Henderson, DM, Chaney, WE, Calderon, FJ, Klonsky, K (2004) On-farm assessment of organic matter and tillage management on vegetable yield, soil, weeds, pests, and economics in California. Agric Ecosyst Environ 103: pp. 443-463 3.11.013" target="_blank" title="It opens in new window">CrossRef
    19. Kerns DL, Matheron ME, Palumbo JC, Sanchez CA, Still DW, Tickes BR, Umeda K, Wilcox MA (1999) Guidelines for Head Lettuce Production in Arizona. IPM Series Number 12. Publication number az1099. Cooperative Extension, College of Agriculture and Life Sciences, University of Arizona, Tucson, Arizona. http://cals.arizona.edu/crops/vegetables/cropmgt/az1099.html. Accessed 1 May 2014
    20. Klonsky K (2010) A Look at California鈥檚 Organic Agriculture Production. University of California Giannini Foundation of Agricultural Economics. ARE Update 14: 8鈥?1
    21. Klonsky, KM (2012) Comparison of production costs and resource use for organic and conventional production systems. Am J Agric Econ 94: pp. 314-321 3/ajae/aar102" target="_blank" title="It opens in new window">CrossRef
    22. Kramer, SB, Reganold, JP, Glover, JD, Bohannan, BJM, Mooney, HA (2006) Reduced nitrate leaching and enhanced denitrifier activity and efficiency in organically fertilized soils. Proc Natl Acad Sci 103: pp. 4522-4527 3/pnas.0600359103" target="_blank" title="It opens in new window">CrossRef
    23. Levesque, CA, Rahe, JE (1992) Herbicide interactions with fungal root pathogens, with special reference to glyphosate. Annu Rev Phytopathol 30: pp. 579-602 30.090192.003051" target="_blank" title="It opens in new window">CrossRef
    24. M盲der, P, Fliessbach, A, Dubois, D, Gunst, L, Fried, P, Niggli, U (2002) Soil fertility and biodiversity in organic farming. Science 296: pp. 1694-1697 CrossRef
    25. Mersie, W, Elliott, J (1993) Selectivity of pronamide and trifluralin in Belgian endive Cichorium entybus. Weed Technol 7: pp. 226-229
    26. Messiha, NAS, Bruggen, AHC, Diepeningen, AD, Vos, OJ, Termorshuizen, AJ, Tjou-Tam-Sin, NNA, Janse, JD (2007) Potato brown rot incidence and severity under different management and amendment regimes in different soil types. Eur J Plant Pathol 119: pp. 367-381 CrossRef
    27. Messiha, NAS, Bruggen, AHC, Franz, E, Janse, JD, Schoeman-Weerdesteijn, ME, Termorshuizen, AJ, Diepeningen, AD (2009) Effects of soil type, management type and soil amendments on the survival of the potato brown rot bacterium Ralstonia solanacearum. Appl Soil Ecol 43: pp. 206-215 CrossRef
    28. Muramoto J (1999) Comparison of Nitrate Content in Leafy Vegetables from Organic and Conventional Farms in California. Center for Agroecology and sustainable Food Systems, University of California. http://www.agroecology.org/documents/Joji/leafnitrate.pdf. Accessed 1 May 2014
    Towards sustainable agricultural systems in the 21st century. The National Academies, Washington
    29. O鈥橞rien, RD, Bruggen, AHC (1992) Accuracy, precision, and correlation to yield loss of disease severity scales for corky root of lettuce. Phytopathology 82: pp. 91-96 CrossRef
    30. O鈥橞rien, RD, Bruggen, AHC (1992) Yield losses to iceberg lettuce due to corky root caused by Rhizomonas suberifaciens. Phytopathology 82: pp. 154-159 CrossRef
    31. O鈥橞rien, RD, Bruggen, AHC (1993) Effect of temperature on corky root of lettuce and growth of the pathogen Rhizomonas suberifaciens. Can J Plant Pathol 15: pp. 85-90 309500831" target="_blank" title="It opens in new window">CrossRef
    32. Ogbuchiekwe, EJ, McGiffen, ME, Ngouajio, M (2004) Economic return in production of lettuce and cantaloupe is affected by cropping system and management practice. HortSci 39: pp. 1321-1325
    33. Potter, TL, Truman, CC, Strickland, TC, Bosch, DD, Webster, TM, Franklin, DH, Bednarz, CW (2006) Combined effects of constant versus variable intensity simulated rainfall and reduced tillage management on cotton preemergence herbicide runoff. J Environ Qual 35: pp. 1894-1902 34/jeq2005.0444" target="_blank" title="It opens in new window">CrossRef
    34. Poudel, DD, Horwath, WR, Lanini, WT, Temple, SR, Bruggen, AHC (2002) Comparison of soil N availability and leaching potential, crop yields and weeds in organic, low-input and conventional farming systems in northern California. Agric Ecosyst Environ 90: pp. 125-137 CrossRef
    35. Purea, M, Sutton, BG (1989) Application of propyzamide Kerb to lettuce via trickle irrigation. Acta Hortic 247: pp. 257-261
    36. Reichard, SL, Sulc, RM, Rhodes, LH, Loux, MM (1997) Effects of herbicides on Sclerotinia crown and stem rot of alfalfa. Plant Dis 81: pp. 787-790 CrossRef
    37. Rouchaud, J, Moons, C, Benoit, F, Ceustermans, N, Maraite, H (1987) Metabolism of 14-C-pronamide in the soil and in lettuce (Lactuca sativa) under field conditions. Weed Sci 35: pp. 469-475
    38. Sanyal, D, Shrestha, A (2008) Direct effect of herbicides on plant pathogens and disease development in various cropping systems. Weed Sci 56: pp. 155-160 CrossRef
    39. Senechkin, IV, Speksnijder, AGCL, Semenov, AM, Bruggen, AHC, Overbeek, LS (2010) Isolation and partial characterization of bacterial strains on low organic carbon medium from soils fertilized with different organic amendments. Microb Ecol 60: pp. 829-839 CrossRef
    40. Senechkin, IV, Overbeek, L, Bruggen, AHC (2014) Greater Fusarium wilt suppression after complex than after simple organic amendments as affected by soil pH, total carbon and ammonia-oxidizing bacteria. Appl Soil Ecol 73: pp. 148-155 3.09.003" target="_blank" title="It opens in new window">CrossRef
    41. Smith RF, Klonsky KM, De Moura RL (2009) Sample Costs to Produce Iceberg Lettuce Head Lettuce, Central Coast Region, Monterey & Santa Cruz Counties. University of California Cooperative Extension. Publ. lt-cc-09-2. Oakland, CA
    42. Smith R, Cahn M, Daugovish O, Koike ST, Natwick E, Smith H, Subbarao K, Takele E, Turini T (2011) Leaf Lettuce Production in California. University of California Vegetable Research and Information Center. Publ 7216. http://anrcatalog.ucdavis.edu/pdf/7216.pdf. Accessed 1 May 2014
    43. Stopes, C, Lord, EI, Philipps, L, Woodward, L (2002) Nitrate leaching from organic farms and conventional farms following best practice. Soil Use Manag 18: pp. 256-263 CrossRef
    44. Subbarao, KV, Hubbard, JC, Schulbach, KF (1997) Comparison of lettuce diseases and yield under subsurface drip and furrow irrigation. Phytopathology 87: pp. 877-883 CrossRef
    45. Tourte L, Smith R F, Klonsky KM, De Moura RL (2009) Sample Costs to Produce Organic Leaf Lettuce. University of California Cooperative Extension. LT-CC-09-O, Oakland, CA
    46. Turini T, Cahn M, Cantwell M, Jackson L, Koike S, Natwick E, Smith R, Subbarao K, Takele E (2011) Iceberg Lettuce Production in California. University of California Vegetable Research and Information Center. Publ 7215. http://anrcatalog.ucdavis.edu/pdf/7215.pdf . Accessed 1 May 2014
    47. Bruggen, AHC, Jochimsen, KN (1993) First report of Rhizomonas suberifaciens causing corky root of lettuce in Australia. Australas. Plant Pathol 22: pp. 14-19
    48. Bruggen, AHC, Rubatzky, VE (1992) Use of transplants instead of direct seeding to reduce corky root severity and losses due to corky root in iceberg lettuce. Plant Dis 76: pp. 703-708 3" target="_blank" title="It opens in new window">CrossRef
    49. Bruggen, AHC, Semenov, AM (1999) A new approach to the search for indicators of root disease suppression. Australas Plant Pathol 28: pp. 4-10 CrossRef
    50. Bruggen, AHC, Termorshuizen, AJ (2003) Integrated approaches to root disease management in organic farming systems. Australas Plant Pathol 32: pp. 141-156 3029" target="_blank" title="It opens in new window">CrossRef
    51. Bruggen, AHC, Grogan, RG, Bogdanoff, CP, Waters, CM (1988) Corky root of lettuce in California caused by a gram鈥憂egative bacterium. Phytopathology 78: pp. 1139-1145 39" target="_blank" title="It opens in new window">CrossRef
    52. Bruggen, AHC, Brown, PR, Jochimsen, KN (1989) Corky root of lettuce caused by strains of a gram鈥憂egative bacterium from muck soils of Florida, New York, and Wisconsin. Appl Environ Microbiol 55: pp. 2635-2640
    53. Bruggen, AHC, Brown, PR, Greathead, AS (1990) Distinction between infectious and non-infectious corky root of lettuce in relation to nitrogen fertilizer. J Am Soc Hortic Sci 115: pp. 762-770
    54. Bruggen, AHC, Brown, PR, Shennan, C, Greathead, AS (1990) The effect of cover crops and fertilization with ammonium nitrate on corky root of lettuce. Plant Dis 74: pp. 584-589 CrossRef
    55. Bruggen, AHC, Jochimsen, KN, Brown, PR (1990) Rhizomonas suberifaciens gen. nov., sp. nov., the causal agent of corky root of lettuce. Int J Syst Bacteriol 40: pp. 175-188 3-40-2-175" target="_blank" title="It opens in new window">CrossRef
    56. Bruggen, AHC, Jochimsen, KN, Steinberger, EM, Segers, P, Gillis, M (1993) Classification of Rhizomonas suberifaciens, an unnamed Rhizomonas species, and Sphingomonas spp. in rRNA superfamily IV. Int J Syst Bacteriol 43: pp. 1-7 3-43-1-1" target="_blank" title="It opens in new window">CrossRef
    57. Bruggen, AHC, Semenov, AM, Diepeningen, AD, Vos, OJ, Blok, WJ (2006) Relation between soil health, wave-like fluctuations in microbial populations, and soil-borne plant disease management. Eur J Plant Pathol 115: pp. 105-122 CrossRef
    58. Bruggen, AHC, Francis, IM, Jochimsen, KN (2014) Non-pathogenic rhizosphere bacteria belonging to the genera Rhizorhapis and Sphingobium provide specific control of lettuce corky root disease caused by the same but not different genera. Plant Pathol.
    59. Bruggen, AHC, Ochoa, O, Francis, IM, Michelmore, RW (2014) Differential interactions between strains of Rhizorhapis, Sphingobium, Sphingopyxis or Rhizorhabdus and accessions of Lactuca spp. with respect to severity of corky root disease. Plant Pathol.
    60. Diepeningen, AD, Vos, OJ, Zelenev, VV, Semenov, AM, Bruggen, AHC (2005) DGGE fragments oscillate with or counter to fluctuations of cultivable bacteria along wheat roots. Microb Ecol 50: pp. 506-517 CrossRef
    61. Diepeningen, AD, Vos, OJ, Korthals, GW, Bruggen, AHC (2006) Effects of organic versus conventional management on chemical and biological parameters in agricultural soils. Appl Soil Ecol 31: pp. 120-135 3.003" target="_blank" title="It opens in new window">CrossRef
    62. Vaughan, MA, Vaughn, KC (1987) Pronamide disrupts mitosis in a unique manner. Pesticide Biochem Physiol 28: pp. 182-193 3575(87)90017-4" target="_blank" title="It opens in new window">CrossRef
    63. Workneh, F, Bruggen, AHC (1994) Suppression of corky root of tomatoes in soils from organic farms associated with soil microbial activity and nitrogen status of soil and tomato tissue. Phytopathology 84: pp. 688-694 CrossRef
    64. Workneh, F, Bruggen, AHC (1994) Microbial density, composition, and diversity in organically and conventionally managed rhizosphere soil in relation to suppression of corky root of tomatoes. Appl Soil Ecol 1: pp. 219-230 393(94)90013-2" target="_blank" title="It opens in new window">CrossRef
    65. Workneh, F, Bruggen, AHC, Drinkwater, LE, Shennan, C (1993) Variables associated with corky root and Phytophthora root rot of tomatoes in organic and conventional farms. Phytopathology 83: pp. 581-589 3-581" target="_blank" title="It opens in new window">CrossRef
    66. Zelenev, VV, Bruggen, AHC, Semenov, AM (2000) 鈥淏ACWAVE鈥? a spatial-temporal model for traveling waves of bacterial populations in response to a moving carbon source in soil. Microb Ecol 40: pp. 260-272
    67. Zelenev, VV, Bruggen, AHC, Semenov, AM (2005) Short-term wavelike dynamics of bacterial populations in response to nutrient input from fresh plant residues. Microb Ecol 49: pp. 83-93 3-1054-3" target="_blank" title="It opens in new window">CrossRef
    68. Zelenev, VV, Bruggen, AHC, Leffelaar, PA, Bloem, J, Semenov, AM (2006) Oscillating dynamics of bacterial populations and their predators in response to fresh organic matter added to soil: the simulation model 鈥楤ACWAVE-WEB鈥? Soil Biol Biochem 38: pp. 1690-1711 CrossRef
  • 刊物类别:Biomedical and Life Sciences
  • 刊物主题:Life Sciences
    Plant Sciences
    Soil Science and Conservation
    Plant Physiology
    Ecology
  • 出版者:Springer Netherlands
  • ISSN:1573-5036
文摘
Aims This study was aimed at testing the hypothesis that lettuce corky root (CR) disease caused by Rhizorhapis suberifaciens was less severe in organic than conventional farms, due to the absence of herbicide and fertilizer, and greater soil microbial activity in organic farms. Methods CR severity and soil quality were assessed in pairs of conventional and organic farms in California. To determine factors contributing to CR, effects of N fertilizer and pronamide herbicide were assessed on CR severity and plant weight in separate field experiments. Results CR was significantly more severe in conventional than organic farms, and there was a negative exponential relationship between CR severity and microbial activity. Split applications of soluble N fertilizer enhanced susceptibility to CR compared to pre-plant application of slow release N fertilizer. Pronamide increased disease severity on seedlings compared to untreated controls and reduced the dry weights of seedlings and mature heads. Conclusions Conventional practices, like fertilizer and herbicide use, increase plant susceptibility to and reduce microbial competition or antibiosis against R. suberifaciens in conventional lettuce production farms, potentially leading to enhanced environmental pollution due to a decrease in nutrient use efficiency and an increased need for fertilizer and water for diseased plants.

© 2004-2018 中国地质图书馆版权所有 京ICP备05064691号 京公网安备11010802017129号

地址:北京市海淀区学院路29号 邮编:100083

电话:办公室:(+86 10)66554848;文献借阅、咨询服务、科技查新:66554700