BvPRR7 is a cold responsive gene with a clock function in beet
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  • 作者:O. Omolade ; A. E. Müller ; C. Jung ; S. Melzer
  • 关键词:Arabidopsis thaliana ; Beta vulgaris ; life cycle ; pseudo response regulator
  • 刊名:Biologia Plantarum
  • 出版年:2016
  • 出版时间:January 2016
  • 年:2016
  • 卷:60
  • 期:1
  • 页码:95-104
  • 全文大小:617 KB
  • 参考文献:Abegg, F.A.: A genetic factor for the annual habit in beets and linkage relationship. — J. agr. Res. 53: 493–511, 1936.
    Andres, F., Coupland, G.: The genetic basis of flowering responses to seasonal cues. — Nat. Rev. Genet. 13: 627–639, 2012.CrossRef PubMed
    Arumuganathan, K., Slattery, J.P., Tanksley, S.D., Earle, E.D.; Preparation and flow cytometric analysis of metaphase chromosomes of tomato. — Theor. appl. Genet. 82: 101–111, 1991.CrossRef PubMed
    Beales, J., Turner, A., Griffiths, S., Snape, J.W., Laurie, D.A.; A pseudo-response regulator is misexpressed in the photoperiod insensitive Ppd-D1a mutant of wheat (Triticum aestivum L.). — Theor. appl. Genet. 115: 721–733, 2007.CrossRef PubMed
    Campoli, C., Shtaya, M., Davis, S.J., Von Korff, M.: Expression conservation within the circadian clock of a monocot; natural variation at barley Ppd-H1 affects circadian expression of flowering time genes, but not clock orthologs. — BMC Plant Biol. 12: 97, 2012.PubMedCentral CrossRef PubMed
    Cao, S.Q., Song, Y.Q., Su, L.: Freezing sensitivity in the gigantea mutant of Arabidopsis is associated with sugar deficiency. — Biol Plant 51: 359–362, 2007.CrossRef
    Chen, Z.J.: Genomic and epigenetic insights into the molecular bases of heterosis. — Nat. Rev. Genet. 14: 471–482, 2013.CrossRef PubMed
    Chia, T.Y., Muller, A., Jung, C., Mutasa-Gottgens, E.S.: Sugar beet contains a large CONSTANS-LIKE gene family including a CO homologue that is independent of the earlybolting (B) gene locus. — J. exp. Bot. 59: 2735–2748, 2008.PubMedCentral CrossRef PubMed
    Clough, S.J., Bent, A.F.: Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.— Plant J. 16: 735–743, 1998.CrossRef PubMed
    Dally, N., Xiao, K., Holtgrawe, D., Jung, C.: The B2 flowering time locus of beet encodes a zinc finger transcription factor. — Proc. nat. Acad. Sci. USA 111: 10365–10370, 2014.PubMedCentral CrossRef PubMed
    Dodd, A.N., Salathia, N., Hall, A., Kevei, E., Toth, R., Nagy, F., Hibberd, J.M., Millar, A.J., Webb, A.A.: Plant circadian clocks increase photosynthesis, growth, survival, and competitive advantage. — Science 309: 630–633, 2005.CrossRef PubMed
    Dohm, J.C., Minoche, A.E., Holtgrawe, D., Capella-Gutierrez, S., Zakrzewski, F., Tafer, H., Rupp, O., Sorensen, T.R., Stracke, R., Reinhardt, R., Goesmann, A., Kraft, T., Schulz, B., Stadler, P.F., Schmidt, T., Gabaldon, T., Lehrach, H., Weisshaar, B., Himmelbauer, H.: The genome of the recently domesticated crop plant sugar beet (Beta vulgaris). — Nature 505: 546–549, 2014.CrossRef PubMed
    Edgar, R.S., Green, E.W., Zhao, Y., Van Ooijen, G., Olmedo, M., Qin, X., Xu, Y., Pan, M., Valekunja, U.K., Feeney, K.A., Maywood, E.S., Hastings, M.H., Baliga, N.S., Merrow, M., Millar, A.J., Johnson, C.H., Kyriacou, C.P., O’Neill, J.S., Reddy, A.B.: Peroxiredoxins are conserved markers of circadian rhythms. — Nature 485: 459–464, 2012.PubMedCentral PubMed
    Farre, E.M., Harmer, S.L., Harmon, F.G., Yanovsky, M.J., Kay, S.A.: Overlapping and distinct roles of PRR7 and PRR9 in the Arabidopsis circadian clock. — Curr. Biol. 15: 47–54, 2005.CrossRef PubMed
    Farre, E.M., Kay, S.A.: PRR7 protein levels are regulated by light and the circadian clock in Arabidopsis. — Plant J. 52; 548–560, 2007.CrossRef PubMed
    Greenup, A., Peacock, W.J., Dennis, E.S., Trevaskis, B.: The molecular biology of seasonal flowering-responses in Arabidopsis and the cereals.— Ann. Bot. 103: 1165–1172, 2009.PubMedCentral CrossRef PubMed
    Höfgen, R., Willmitzer, L.: Storage of competent cells for Agrobacterium transformation. — Nucl. Acids Res. 16: 9877, 1988.PubMedCentral CrossRef PubMed
    Imaizumi, T.: Arabidopsis circadian clock and photoperiodism; time to think about location. — Curr. Opin. Plant Biol. 13; 83–89, 2010.PubMedCentral CrossRef PubMed
    Ito, S., Nakamichi, N., Matsushika, A., Fujimori, T., Yamashino, T., Mizuno, T.: Molecular dissection of the promoter of the light-induced and circadian-controlled APRR9 gene encoding a clock-associated component of Arabidopsis thaliana. — Biosci. Biotechnol. Biochem. 69; 382–390, 2005.CrossRef PubMed
    James, A.B., Syed, N.H., Bordage, S., Marshall, J., Nimmo, G.A., Jenkins, G.I., Herzyk, P., Brown, J.W., Nimmo, H.G.; Alternative splicing mediates responses of the Arabidopsis circadian clock to temperature changes. — Plant Cell 24; 961–981, 2012.PubMedCentral CrossRef PubMed
    Jung, C., Müller, A.E.: Flowering time control and applications in plant breeding. — Trends Plant Sci 14: 563–573, 2009.CrossRef PubMed
    Karlgren, A., Gyllenstrand, N., Kallman, T., Lagercrantz, U.; Conserved function of core clock proteins in the gymnosperm Norway spruce (Picea abies L. Karst). — PLoS ONE 8: e60110, 2013.PubMedCentral CrossRef PubMed
    Kinmonth-Schultz, H.A., Golembeski, G.S., Imaizumi, T.; Circadian clock-regulated physiological outputs: dynamic responses in nature. — Semin. cell. dev. Biol. 24: 407–413, 2013.PubMedCentral CrossRef PubMed
    Koornneef, M., Hanhart, C.J., Van der Veen, J.H.: A genetic and physiological analysis of late flowering mutants in Arabidopsis thaliana. — Mol. gen. Genet. 229: 57–66, 1991.CrossRef PubMed
    Li, Z.K., Yu, S.B., Lafitte, H.R., Huang, N., Courtois, B., Hittalmani, S., Vijayakumar, C.H., Liu, G.F., Wang, G.C., Shashidhar, H.E., Zhuang, J.Y., Zheng, K.L., Singh, V.P., Sidhu, J.S., Srivantaneeyakul, S., Khush, G.S.: QTL × environment interactions in rice. I. heading date and plant height. — Theor. appl. Genet. 108: 141–153, 2003.CrossRef PubMed
    Lin, S.Y., Sasaki, T., Yano, M.: Mapping quantitative trait loci controlling seed dormancy and heading date in rice, Oryza sativa L., using backcross inbred lines. — Theor. appl. Genet. 96: 997–1003, 1998.CrossRef
    Locke, J.C., Kozma-Bognar, L., Gould, P.D., Feher, B., Kevei, E., Nagy, F., Turner, M.S., Hall, A., Millar, A.J.; Experimental validation of a predicted feedback loop in the multi-oscillator clock of Arabidopsis thaliana. — Mol. Syst. Biol. 2: 59, 2006.PubMedCentral CrossRef PubMed
    Matsushika, A., Makino, S., Kojima, M., Mizuno, T.: Circadian waves of expression of the APRR1/TOC1 family of pseudoresponse regulators in Arabidopsis thaliana: insight into the plant circadian clock. — Plant Cell Physiol. 41: 1002–1012, 2000.CrossRef PubMed
    McClung, C.R.: A modern circadian clock in the common angiosperm ancestor of monocots and eudicots. — BMC Biol. 8: 55, 2010.PubMedCentral CrossRef PubMed
    Melzer, S., Müller, A.E., Jung, C.: Genetics and genomics of flowering time regulation in sugar beet. — In: Tuberosa, R., Graner, A., Frison, E. (ed.): Genomics of Plant Genetic Resources. Pp. 3–26. Springer, Dordrecht 2014.CrossRef
    Mizoguchi, T., Wheatley, K., Hanzawa, Y., Wright, L., Mizoguchi, M., Song, H.R., Carre, I.A., Coupland, G.: LHY and CCA1 are partially redundant genes required to maintain circadian rhythms in Arabidopsis. — Dev. Cell 2; 629–641, 2002.CrossRef PubMed
    Murakami, M., Tago, Y., Yamashino, T., Mizuno, T.; Characterization of the rice circadian clock-associated pseudo-response regulators in Arabidopsis thaliana. — Biosci. Biotechnol. Biochem. 71: 1107–1010, 2007.CrossRef PubMed
    Murphy, R.L., Klein, R.R., Morishige, D.T., Brady, J.A., Rooney, W.L., Miller, F.R., Dugas, D.V., Klein, P.E., Mullet, J.E.: Coincident light and clock regulation of pseudoresponse regulator protein 37 (PRR37) controls photoperiodic flowering in sorghum. — Proc. nat. Acad. Sci. USA 108: 16469–16474, 2011.PubMedCentral CrossRef PubMed
    Nagel, D.H., Kay, S.A.: Complexity in the wiring and regulation of plant circadian networks. — Curr. Biol. 22; R648–R657, 2012.PubMedCentral CrossRef PubMed
    Nakamichi, N., Kiba, T., Henriques, R., Mizuno, T., Chua, N.H., Sakakibara, H.: PSEUDO-RESPONSE REGULATORS 9, 7, and 5 are transcriptional repressors in the Arabidopsis circadian clock. — Plant Cell 22: 594–605, 2010.PubMedCentral CrossRef PubMed
    Nakamichi, N., Kita, M., Ito, S., Yamashino, T., Mizuno, T.; PSEUDO-RESPONSE REGULATORS PRR9, PRR7 and PRR5, together play essential roles close to the circadian clock of Arabidopsis thaliana. — Plant Cell Physiol. 46: 686–698, 2005.CrossRef PubMed
    Ouyang, Y., Andersson, C.R., Kondo, T., Golden, S.S., Johnson, C.H.: Resonating circadian clocks enhance fitness in cyanobacteria. — Proc. nat. Acad. Sci. USA 95: 8660–8664, 1998.PubMedCentral CrossRef PubMed
    Pfaffl, M.W.: A new mathematical model for relative quantification in real-time RT-PCR. — Nucl. Acids Res. 29; e45, 2001.PubMedCentral CrossRef PubMed
    Pin, P.A., Zhang, W., Vogt, S.H., Dally, N., Buttner, B., Schulze-Buxloh, G., Jelly, N.S., Chia, T.Y., Mutasa-Gottgens, E.S., Dohm, J.C., Himmelbauer, H., Weisshaar, B., Kraus, J., Gielen, J.J., Lommel, M., Weyens, G., Wahl, B., Schechert, A., Nilsson, O., Jung, C., Kraft, T., Müller, A.E.: The role of a pseudo-response regulator gene in life cycle adaptation and domestication of beet. — Curr. Biol. 22; 1095–1101, 2012.CrossRef PubMed
    Salome, P.A., McClung, C.R.: PSEUDO-RESPONSE REGULATOR 7 and 9 are partially redundant genes essential for the temperature responsiveness of the Arabidopsis circadian clock. — Plant Cell 17: 791–803, 2005.PubMedCentral CrossRef PubMed
    Salome, P.A., Weigel, D., McClung, C.R.: The role of the Arabidopsis morning loop components CCA1, LHY, PRR7, and PRR9 in temperature compensation. — Plant Cell 22; 3650–3661, 2010.PubMedCentral CrossRef PubMed
    Sawa, M., Kay, S.A., Imaizumi, T.: Photoperiodic flowering occurs under internal and external coincidence. — Plant Signal Behav. 3: 269–271, 2008.PubMedCentral CrossRef PubMed
    Suarez-Lopez, P., Wheatley, K., Robson, F., Onouchi, H., Valverde, F., Coupland, G.: CONSTANS mediates between the circadian clock and the control of flowering in Arabidopsis. — Nature 410: 1116–1120, 2001.CrossRef PubMed
    Takata, N., Saito, S., Saito, C.T., Uemura, M.: Phylogenetic footprint of the plant clock system in angiosperms; evolutionary processes of pseudo-response regulators. — BMC Evol. Biol. 10: 126, 2010.PubMedCentral CrossRef PubMed
    Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., Kumar, S.: MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. — Mol. Biol. Evol. 28; 2731–2739, 2011.PubMedCentral CrossRef PubMed
    Turck, F., Fornara, F., Coupland, G.: Regulation and identity of florigen: FLOWERING LOCUS T moves center stage. — Annu. Rev. Plant Biol. 59: 573–594, 2008.CrossRef PubMed
    Turner, A., Beales, J., Faure, S., Dunford, R.P., Laurie, D.A.; The pseudo-response regulator Ppd-H1 provides adaptation to photoperiod in barley. — Science 310: 1031–1034, 2005.CrossRef PubMed
    Valverde, F.: CONSTANS and the evolutionary origin of photoperiodic timing of flowering. — J. exp. Bot. 62: 2453–2563, 2011.CrossRef PubMed
    Wang, Z.Y., Tobin, E.M.: Constitutive expression of the CIRCADIAN CLOCK ASSOCIATED 1 (CCA1) gene disrupts circadian rhythms and suppresses its own expression. — Cell 93: 1207–1217, 1998.CrossRef PubMed
    Wenkel, S., Turck, F., Singer, K., Gissot, L., Le Gourrierec, J., Samach, A., Coupland, G.: CONSTANS and the CCAAT box binding complex share a functionally important domain and interact to regulate flowering of Arabidopsis. — Plant Cell 18: 2971–2984, 2006.PubMedCentral CrossRef PubMed
    Yamamoto, Y., Sato, E., Shimizu, T., Nakamich, N., Sato, S., Kato, T., Tabata, S., Nagatani, A., Yamashino, T., Mizuno, T.: Comparative genetic studies on the APRR5 and APRR7 genes belonging to the APRR1/TOC1 quintet implicated in circadian rhythm, control of flowering time, and early photomorphogenesis. — Plant Cell Physiol. 44: 1119–1130, 2003.CrossRef PubMed
    Yang, S., Murphy, R.L., Morishige, D.T., Klein, P.E., Rooney, W.L., Mullet, J.E.: Sorghum phytochrome B inhibits flowering in long days by activating expression of SbPRR37 and SbGHD7, repressors of SbEHD1, SbCN8 and SbCN12. — PLoS ONE 9: e105352, 2014.PubMedCentral CrossRef PubMed
    Yano, M., Sasaki, T.: Genetic and molecular dissection of quantitative traits in rice. — Plant mol. Biol. 35: 145–153, 1997.CrossRef PubMed
    Zeilinger, M.N., Farre, E.M., Taylor, S.R., Kay, S.A., Doyle, F.J.: A novel computational model of the circadian clock in Arabidopsis that incorporates PRR7 and PRR9. — Mol. syst. Biol. 2: 58, 2006.PubMedCentral CrossRef PubMed
  • 作者单位:O. Omolade (1)
    A. E. Müller (2)
    C. Jung (1)
    S. Melzer (1)

    1. Plant Breeding Institute, Christian-Albrechts-University of Kiel, Olshausenstr. 40, D-24098, Kiel, Germany
    2. Strube Research GmbH & Co. KG, D-38387, Söllingen, Germany
  • 刊物类别:Biomedical and Life Sciences
  • 刊物主题:Life Sciences
    Plant Sciences
  • 出版者:Springer Netherlands
  • ISSN:1573-8264
文摘
The life cycle of flowering plants is partially defined by environmental cues like day length and temperature. In the model plant Arabidopsis thaliana and temperate cereals, such as barley (Hordeum vulgare) and wheat (Triticum spp.), differences in life cycle control have been associated with a natural variation in FLOWERING LOCUS C (FLC) and VERNALIZATION 1-3 (VRN1-3). In sugar beet (Beta vulgaris L.), variation in vernalization requirement and life cycle is determined by a major gene at the B locus. This gene has recently been identified as a pseudo-response regulator (PRR) gene BOLTING TIME CONTROL 1 (BTC1). A second gene in beet with homology to BTC1 and ARABIDOPSIS PSEUDO RESPONSE REGULATOR 7 (APRR7) in Arabidopsis was identified and termed Beta vulgaris PSEUDO RESPONSE REGULATOR 7 (BvPRR7). We functionally characterized BvPRR7 by transgenic analysis in Arabidopsis and expression profiling during development in beet. We show that BvPRR7 was diurnally regulated and responded to cold. Constitutive expression of BvPRR7 distorted diurnal rhythms and caused late flowering in Arabidopsis suggesting a conserved function of BvPRR7 in clock regulation. Conceivably, the retention of a functional role of BvPRR7 in clock regulation may have facilitated the evolution of a distinct role as major floral regulator of the second PRR7 homolog in beet, BTC1. Additional key words Arabidopsis thaliana Beta vulgaris life cycle pseudo response regulator

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