Development of SNP markers for Ayous (Triplochiton scleroxylon K. Schum) an economically important tree species from tropical West and Central Africa
详细信息 查看全文
- 作者：D. I. Jardine ; C. Blanc-Jolivet ; R. R. M. Dixon…
- 刊名：Conservation Genetics Resources
- 出版年：2016
- 出版时间：June 2016
- 年：2016
- 卷：8
- 期：2
- 页码：129-139
- 全文大小：349 KB
- 刊物主题：Conservation Biology/Ecology; Plant Sciences; Animal Anatomy / Morphology / Histology; Evolutionary Biology;
- 出版者：Springer Netherlands
- ISSN：1877-7260
- 卷排序：8
文摘
182 SNP markers were developed for Ayous (Triplochiton scleroxylon K. Schum) by incorporating information from two next generation sequencing approaches (RADseq Floragenex and AFLPseq IonTorrent PGM) into a single genotyping panel for MassARRAY® iPLEX™. This set of markers was successfully used to genotype 753 individuals from 43 populations in five Tropical West and Central African Countries. These loci have an expected heterozygosity range of 0.007–0.501 and FST from 0 to 0.306.KeywordsSingle nucleotide polymorphismMassARRAYObecheTimber trackingCameroonCongoGhana