The putative α/β-hydrolases of Dietzia cinnamea P4 strain as potential enzymes for biocatalytic applications

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• 作者：Luciano Procópio (1) (2)
  Andrew Macrae (3)
  Jan Dirk van Elsas (2)
  Lucy Seldin (1)
  
• 关键词：Dietzia cinnamea P4 ; Sequence analysis ; α/β ; Hydrolase fold ; Epoxide hydrolases
• 刊名：Antonie van Leeuwenhoek
• 出版年：2013
• 出版时间：March 2013
• 年：2013
• 卷：103
• 期：3
• 页码：635-646
• 全文大小：553KB
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• 作者单位：Luciano Procópio (1) (2)
  Andrew Macrae (3)
  Jan Dirk van Elsas (2)
  Lucy Seldin (1)
  
  1. Laboratório de Genética Microbiana, Departamento de Microbiologia Geral, Instituto de Microbiologia Prof. Paulo de Góes, Centro de Ciências da Saúde, Universidade Federal do Rio de Janeiro, Bloco I, Ilha do Fund?o, Rio de Janeiro, RJ, CEP 21941.590, Brazil
  2. CEES, Department of Microbial Ecology, University of Groningen, Kerklaan 30, 9751 NN, Haren, The Netherlands
  3. Laboratório de Biotecnologia Sustentável e Bioinformática Microbiana, Departamento de Microbiologia Geral, Instituto de Microbiologia Prof. Paulo de Góes, Centro de Ciências da Saúde, Universidade Federal do Rio de Janeiro, Bloco I, Ilha do Fund?o, Rio de Janeiro, RJ, CEP 21941.590, Brazil
  
• ISSN：1572-9699

文摘

The draft genome of the soil actinomycete Dietzia cinnamea P4 reveals a versatile group of α/β-hydrolase fold enzymes. Phylogenetic and comparative sequence analyses were used to classify the α/β-hydrolases of strain P4 into six different groups: (i) lipases, (ii) esterases, (iii) epoxide hydrolases, (iv) haloacid dehalogenases, (v) C–C breaking enzymes and (vi) serine peptidases. The high number of lipases/esterases (41) and epoxide hydrolase enzymes (14) present in the relatively small (3.6?Mb) P4 genome is unusual; it is likely to be linked to the survival of strain P4 in its natural environment. Strain P4 is thus equipped with a large number of genes which would appear to confer survivability in harsh hot tropical soil. As such, this highly resilient soil bacterial strain provides an interesting genome for enzyme mining for applications in the field of biotransformations of polymeric compounds.