Novel resistance mechanism of barley chlorina f104 antenna mutant against photoinhibition: possible role of new identified chloroplastic cpNrp protein
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  • 作者:Mari谩n Bresti膷 ; Marek 沤iv膷谩k ; Miroslav 膸atko…
  • 关键词:Chlorophyll fluorescence ; Mass spectrometry ; Photooxidative stress ; Proteomics ; Two ; dimensional electrophoresis
  • 刊名:Theoretical and Experimental Plant Physiology
  • 出版年:2015
  • 出版时间:March 2015
  • 年:2015
  • 卷:27
  • 期:1
  • 页码:75-85
  • 全文大小:
  • 参考文献:Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403鈥?10CrossRef PubMed
    Anantharaman V, Aravind L (2002) The PRC-barrel: a widespread, conserved domain shared by photosynthetic reaction center subunits and proteins of RNA metabolism. Genome Biol 3:research0061.0061鈥搑esearch0061.0069
    Andrianopoulos A, Kourambas S, Sharp JA, Davis MA, Hynes MJ (1998) Characterization of the Aspergillus nidulans nmrA gene involved in nitrogen metabolite repression. J Bacteriol 180:1973鈥?977PubMed Central PubMed
    Attisano L, Tuen Lee-Hoeflich S (2001) The Smads. Genome Biol 2:3010.1鈥?010.8CrossRef
    Bateman A, Coin L, Durbin R, Finn RD, Hollich V, Griffiths-Jones S, Khanna A, Marshall M, Moxon S, Sonnhammer ELL, Studholme DJ, Yeats C, Eddy SR (2004) The Pfam protein families database. Nucleic Acids Res 32:D138鈥揇141CrossRef PubMed Central PubMed
    Bossmann B, Knoetzel J, Jansson S (1997) Screening of chlorina mutants of barley (Hordeum vulgare L.) with antibodies against light-harvesting proteins of PS I and PS II: absence of specific antenna proteins. Photosynth Res 52:127鈥?36CrossRef
    Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248鈥?54CrossRef PubMed
    Brestic M, Zivcak M, Olsovska K, Repkova J (2008) Functional study of PS II and PS I energy use and dissipation mechanisms in barley wild type and chlorina mutants under high light conditions. Photosynthesis energy from the sun. Springer, Dordrecht, pp 1407鈥?411CrossRef
    Brestic M, Zivcak M, Kalaji HM, Carpentier R, Allakhverdiev SI (2012) Photosystem II thermostability in situ: environmentally induced acclimation and genotype-specific reactions in Triticum aestivum L. Plant Physiol Biochem 57:93鈥?05CrossRef PubMed
    Brestic M, Zivcak M, Olsovska K, Kalaji HM, Shao HB, Hakeem KR (2013) Heat signaling and stress responses in photosynthesis, In: Plant signaling: understanding the molecular cross-talk, Springer, New Delhi, pp 241鈥?56
    Brestic M, Zivcak M, Olsovska K, Shao HB, Kalaji HM, Allakhverdiev SI (2014) Reduced glutamine synthetase activity plays a role in control of photosynthetic responses to high light in barley leaves. Plant Physiol Biochem 81:74鈥?3
    Davis MA, Hynes MJ (1987) Complementation of areA - regulatory gene mutations of Aspergillus nidulans by the heterologous gene nit-2 of Neurospora crassa. Proc Natl Acad Sci USA 84:3753鈥?757CrossRef PubMed Central PubMed
    Emanuelsson O, Nielsen H, Brunak S, von Heijne G (2000) Predicting subcellular localization of proteins based on their N-terminal amino acid sequence. J Mol Biol 300:1005鈥?016CrossRef PubMed
    Evans JR (1993) Photosynthesis acclimation and nitrogen partitioning within a lucerne canopy. Stability through time and comparison with a theoretical optimum. Aust J Plant Physiol 20:69鈥?2CrossRef
    Foyer CH, Noctor G (2009) Redox regulation in photosynthetic organisms: signaling, acclimation, and practical implications. Antioxid Redox Signal 11:861鈥?05CrossRef PubMed
    Fu YH, Marzluf GA (1990) Nit-2, the major positive-acting nitrogen regulatory gene of Neurospora crassa, encodes a sequence-specific DNA-binding protein. Proc Natl Acad Sci USA 87:5331鈥?335CrossRef PubMed Central PubMed
    Gilmore AM, Hazlett TL, Debrunner PG, Govindjee S (1996) Photosystem II chlorophyll a fluorescence lifetimes and intensity are independent of the antenna size differences between barley wild-type and chlorina mutants: photochemical quenching and xanthophyll cycle-dependent nonphotochemical quenching of fluorescence. Photosynth Res 48:171鈥?87CrossRef PubMed
    Grove G, Marzluf GA (1981) Identification of the product of the major regulatory gene of the nitrogen control circuit of Neurospora crassa as a nuclear DNA-binding protein. J Biol Chem 256:463鈥?70PubMed
    Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 41:95鈥?8
    Higgins DG, Thompson JD, Gibson TJ (1996) Using CLUSTAL for multiple sequence alignments. Comput Methods Macromol Seq Anal 266:383鈥?02CrossRef
    Kalaji HM, Schansker G, Ladle RJ, Goltsev V, Bosa K, Allakhverdiev SI et al (2014) Frequently asked questions about in vivo chlorophyll fluorescence: practical issues. Photosynth Res 122:121鈥?58CrossRef PubMed Central PubMed
    Klughammer C, Schreiber U (1994) An improved method, using saturating light pulses, for the determination of photosystem I quantum yield via P700+-absorbance changes at 830 nm. Planta 192:261鈥?68CrossRef
    Kotaka M, Johnson C, Lamb HK, Hawkins AR, Ren J, Stammers DK (2008) Structural analysis of the recognition of the negative regulator NmrA and DNA by the zinc finger from the GATA-Type transcription factor AreA. J Mol Biol 381:373鈥?82CrossRef PubMed
    Lamb H, Leslie K, Dodds AL, Nutley M, Cooper A, Johnson C, Thompson P, Stammers DK, Hawkins AR (2003) The negative transcriptional regulator NmrA discriminates between oxidized and reduced dinucleotides. J Biol Chem 278:32107鈥?2114CrossRef PubMed
    Lamb HK, Ren J, Park A, Johnson C, Leslie K, Cocklin S, Thompson P, Mee C, Cooper A, Stammers DK, Hawkins AR (2004) Modulation of the ligand binding properties of the transcription repressor NmrA by GATA-containing DNA and site-directed mutagenesis. Protein Sci 13:3127鈥?138CrossRef PubMed Central PubMed
    Lichtenthaler HL (1987) Chlorophyll and carotenoids: pigments of photosynthetic biomembranes. Methods Enzymol 148:350鈥?82CrossRef
    Marzluf GA (1997) Genetic regulation of nitrogen metabolism in the fungi. Microbiol Mol Biol Rev 61:17鈥?2PubMed Central PubMed
    Melis A (1999) Photosystem-II damage and repair cycle in chloroplasts: what modulates the rate of photodamage in vivo? Trends Plant Sci 4:130鈥?35CrossRef PubMed
    Nasmith CG, Walkowiak S, Wang L, Leung WWY, Gong Y et al (2011) Tri6 is a global transcription regulator in the phytopathogen Fusarium graminearum. PLoS Pathog 7(9):e1002266. doi:10.鈥?371/鈥媕ournal.鈥媝pat.鈥?002266 CrossRef PubMed Central PubMed
    Nichols CE, Cocklin S, Dodds A, Ren J, Lamb H, Hawkins AR, Stammers DK (2001) Expression, purification and crystallization of Aspergillus nidulans NmrA, a negative regulatory protein involved in nitrogen-metabolite repression. Acta Crystallogr Sect D-Biol 57:1722鈥?725CrossRef
    N煤帽ez-Corcuera B, Serafimidis I, Arias-Palomo E, Rivera-Calzada A, Suarez T (2008) A new protein carrying an NmrA-like domain is required for cell differentiation and development in Dictyostelium discoideum. Dev Biol 321:331鈥?42CrossRef PubMed
    Peng CL, Gilmore AM (2002) Comparison of high-light effects with and without methyl viologen indicate barley chlorina mutants exhibit contrasting sensitivities depending on the specific nature of the chlorina mutation: comparison of wild type, chlorophyll-b-less chlo f2 and light-sensitive chlorophyll-b-deficient chlo f104 mutants. Funct Plant Biol 29:1171鈥?180CrossRef
    Peng CL, Duan J, Lin G, Gilmore AM (2002) Correlation between photoinhibition sensitivity and the rates and relative extents of xanthophyll cycle de-epoxidation in Chlorina mutants of barley (Hordeum vulgare L.). Photosynthetica 40:503鈥?08CrossRef
    Perssona B, Kallberga Y, Brayd JE, Bruforde E, Dellaportaf SL, Faviag AD, Gonzalez Duarteh R, J枚rnvall H, Kavanaghd KL, Kedishvili N, Kisiela M, Maserk E, Mindnichl R, Orchardg S, Penningl TM, Thorntong JM, Adamskim J, Oppermannd U (2009) The SDR (short-chain dehydrogenase/reductase and related enzymes) nomenclature initiative. Chem Biol Interact 78:94鈥?8CrossRef
    Rutter J, Reick M, Wu LC, McKnight SL (2001) Regulation of clock and NPAS2 DNA binding by the redox state of NAD cofactors. Science 293:510鈥?14CrossRef PubMed
    Schreiber U (1986) Detection of rapid induction kinetics with a new type of high frequency modulated chlorophyll fluorescence. Photosynth Res 9:261鈥?72CrossRef PubMed
    Shao HB, Chu LY (2005) Plant molecular biology in China opportunities and challenges. Plant Mol Biol Report 23:345鈥?58CrossRef
    Shevchenko A, Wilm A, Vorm O, Mann M (1996) Mass spectrometric sequencing of protein from silver-stained polyacrylamide gels. Anal Chem 68:850鈥?58CrossRef PubMed
    Shi Y, Shi Y (2004) Metabolic enzymes and coenzimes in transcription鈥攁 direct link between metabolism and transcription? Trends Genet 20:445鈥?52CrossRef PubMed
    Stammers DK, Ren J, Leslie K, Nichols CE, Lamb HK, Cocklin S, Dodds A, Hawkins AR (2001) The structure of the negative transcriptional regulator NmrA reveals a structural superfamily which includes the short-chain dehydrogenase/reductases. EMBO J 20:6619鈥?626CrossRef PubMed Central PubMed
    Stirbet A, Govindjee S (2011) On the relation between the Kautsky effect (chlorophyll a fluorescence induction) and photosystem II: basics and applications of the OJIP fluorescence transient. J Photochem Photobiol B 104:236鈥?57CrossRef PubMed
    Strasser RJ, Srivastava A, Tsimilli-Michael M (2000) The fluorescence transient as a tool to characterize and screen photosynthetic samples. In: Yunus M, Pathre U, Mohanty P (eds) Probing photosynthesis: mechanisms regulation and adaptation. Taylor and Francis, London, pp 443鈥?80
    Thompson JD, Higgins DG, Gibson TJ (1994) Clustal-W鈥攊mproving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673鈥?680CrossRef PubMed Central PubMed
    Wilson RA, Arst HN (1998) Mutational analysis of AreA, a transcriptional activator mediating nitrogen metabolite repression in Aspergillus nidulans and a member of the 鈥榮treetwise鈥?GATA family of transcription factors. Microbiol Mol Biol Rev 62:586鈥?96PubMed Central PubMed
    Wu G, Chu LY, Shao HB, Cai JW (2007) Insights into molecular mechanisms of mutual effect between plants and the environment. A review. Agron Sustain Dev 27:1鈥?0CrossRef
    Xiao X, Fu YH, Marzluf GA (1995) The negative-acting NMR regulatory protein of Neurospora crassa binds to and inhibits the DNA-binding activity of the positive-acting nitrogen regulatory protein NIT2. Biochemistry 34:8861鈥?868CrossRef PubMed
    Zheng X, Dai X, Zhao Y, Chen Q, Lu F, Yao D, Yu Q, Liu X, Zhang C, Gu X, Luo M (2007) Restructuring of the dinucleotide-binding fold in an NADP(H) sensor protein. Proc Natl Acad Sci USA 104:8809鈥?814CrossRef PubMed Central PubMed
    Zivcak M, Brestic M, Balatova Z, Drevenakova P, Olsovska K, Kalaji HM, Yang X, Allakhverdiev SI (2013) Photosynthetic electron transport and specific photoprotective responses in wheat leaves under drought stress. Photosynth Res 117(1鈥?):529鈥?46CrossRef PubMed
    Zivcak M, Brestic M, Kalaji HM, Govindjee (2014) Photosynthetic responses of sun-and shade-grown barley leaves to high light: is the lower PSII connectivity in shade leaves associated with protection against excess of light? Photosynth Res 119:339鈥?54CrossRef PubMed Central PubMed
  • 作者单位:Mari谩n Bresti膷 (1)
    Marek 沤iv膷谩k (1)
    Miroslav 膸atko (1)
    Katar铆na Ol拧ovsk谩 (1)
    Oksana Sytar (1) (2)
    Hongbo Shao (3) (4)

    1. Department of Plant Physiology, Slovak Agricultural University in Nitra, Tr. A. Hlinku 2, 949 76, Nitra, Slovak Republic
    2. Department of Plant Physiology and Ecology, Taras Shevchenko National University of Kyiv, Volodymyrs鈥檏a St. 64, Kiev, 01601, Ukraine
    3. Key Laboratory of Coastal Biology & Bioresources Utilization, Yantai Institute of Coastal Zone Research (YIC), Chinese Academy of Sciences (CAS), Yantai, 264003, China
    4. Institute for Life Sciences, Qingdao University of Science & Technology, Zhengzhou Road 53, Qingdao, 266042, China
  • 刊物类别:Life Sciences, general;
  • 刊物主题:Life Sciences, general;
  • 出版者:Springer International Publishing
  • ISSN:2197-0025
文摘
Protein with NmrA domain serving as the receptor for oxidized NAD+/NADP was identified in chloroplasts of spring barley mutant chlorina f104. NmrA was upregulated under environmental stresses in comparison to wild type plants. Following bioinformatic analysis revealed the nuclear localization signal in this protein. Pathways for the protein transport from cytoplasm into the chloroplast are described, but the mechanism of protein transport from chloroplast to nucleus, where the gene transcription can be possibly affected, is not clear. This protein named as cpNrp (chloroplastic NmrA related protein) is probably a member of new protein family and can serve as chloroplastic redox receptor. Consequently, cpNrp transported as a signal molecule into the nucleus and influences on the gene transcription under environmental stresses (high light radiation). It can be suggested that the presence of these proteins in chloroplasts of chlorina f104 barley mutant is related to up-regulation of photoprotective mechanisms, contributing to maintenance of high resistance against photooxidative damage in conditions of excessive light intensity. Keywords Chlorophyll fluorescence Mass spectrometry Photooxidative stress Proteomics Two-dimensional electrophoresis

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